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(-) Description

Title :  THE STRUCTURE OF CBB3 CYTOCHROME OXIDASE.
 
Authors :  S. Buschmann, E. Warkentin, H. Xie, M. Kohlstaedt, J. D. Langer, U. Erml H. Michel
Date :  02 Sep 15  (Deposition) - 13 Jan 16  (Release) - 27 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.20
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,K,L,M,N,O,P,Q
Biol. Unit 1:  A,B,C,N  (1x)
Biol. Unit 2:  D,E,F,O  (1x)
Biol. Unit 3:  G,H,I,P  (1x)
Biol. Unit 4:  K,L,M,Q  (1x)
Keywords :  Oxidoreductase, Cbb3-Cytochrome C Oxidase, Pseudomonas_stutzeri (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Buschmann, E. Warkentin, H. Xie, J. D. Langer, U. Ermler, H. Michel
The Structure Of Cbb3 Cytochrome Oxidase Provides Insights Into Proton Pumping.
Science V. 329 327 2010
PubMed-ID: 20576851  |  Reference-DOI: 10.1126/SCIENCE.1187303
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT CCON1
    Chains: A, D, G, K
    EC Number: 1.9.3.1
    Organism Scientific: PSEUDOMONAS STUTZERI
    Organism Taxid: 316
    Synonym: CYTOCHROME CBB3 SUBUNIT CCON1
 
Molecule 2 - CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT II
    Chains: B, E, H, L
    Organism Scientific: PSEUDOMONAS STUTZERI
    Organism Taxid: 316
    Synonym: CYTOCHROME C OXIDASE,CBB3-TYPE,SUBUNIT O
 
Molecule 3 - CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT CCOP1
    Chains: C, F, I, M
    Organism Scientific: PSEUDOMONAS STUTZERI
    Organism Taxid: 316
    Synonym: CBB3-COX SUBUNIT CCOP1,C-TYPE CYTOCHROME CCOP1,CYT C(P1), CYTOCHROME C OXIDASE SUBUNIT III
 
Molecule 4 - PUTATIVE UNCHARACTERIZED PROTEIN
    Chains: N, O, P, Q
    Organism Scientific: PSEUDOMONAS STUTZERI ATCC 14405 CCUG 16156
    Organism Taxid: 32042

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit : ABCDEFGHIKLMNOPQ
Biological Unit 1 (1x): ABC         N   
Biological Unit 2 (1x):    DEF       O  
Biological Unit 3 (1x):       GHI     P 
Biological Unit 4 (1x):          KLM   Q

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 44)

Asymmetric Unit (7, 44)
No.NameCountTypeFull Name
1CA8Ligand/IonCALCIUM ION
2CU4Ligand/IonCOPPER (II) ION
3FC64Ligand/IonHEXACYANOFERRATE(3-)
4HEC12Ligand/IonHEME C
5HEM8Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
6PEO4Ligand/IonHYDROGEN PEROXIDE
7PO44Ligand/IonPHOSPHATE ION
Biological Unit 1 (5, 8)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CU-1Ligand/IonCOPPER (II) ION
3FC61Ligand/IonHEXACYANOFERRATE(3-)
4HEC3Ligand/IonHEME C
5HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
6PEO1Ligand/IonHYDROGEN PEROXIDE
7PO41Ligand/IonPHOSPHATE ION
Biological Unit 2 (5, 8)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CU-1Ligand/IonCOPPER (II) ION
3FC61Ligand/IonHEXACYANOFERRATE(3-)
4HEC3Ligand/IonHEME C
5HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
6PEO1Ligand/IonHYDROGEN PEROXIDE
7PO41Ligand/IonPHOSPHATE ION
Biological Unit 3 (5, 8)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CU-1Ligand/IonCOPPER (II) ION
3FC61Ligand/IonHEXACYANOFERRATE(3-)
4HEC3Ligand/IonHEME C
5HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
6PEO1Ligand/IonHYDROGEN PEROXIDE
7PO41Ligand/IonPHOSPHATE ION
Biological Unit 4 (5, 8)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CU-1Ligand/IonCOPPER (II) ION
3FC61Ligand/IonHEXACYANOFERRATE(3-)
4HEC3Ligand/IonHEME C
5HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
6PEO1Ligand/IonHYDROGEN PEROXIDE
7PO41Ligand/IonPHOSPHATE ION

(-) Sites  (53, 53)

Asymmetric Unit (53, 53)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:122 , TYR A:123 , TRP A:203 , VAL A:210 , TYR A:251 , HIS A:257 , HIS A:258 , LEU A:279 , SER A:283 , GLY A:324 , PRO A:325 , MET A:327 , ALA A:328 , ASN A:333 , HIS A:337 , HIS A:345 , VAL A:346 , GLY A:349 , HEM A:502 , PEO A:505 , CA A:507 , SER B:102binding site for residue HEM A 501
02AC2SOFTWAREMET A:29 , GLY A:32 , VAL A:33 , ALA A:36 , ARG A:57 , HIS A:60 , VAL A:64 , ILE A:65 , GLU A:122 , TYR A:123 , ASP A:340 , ILE A:343 , VAL A:346 , HIS A:347 , ALA A:350 , LEU A:351 , TYR A:395 , ARG A:437 , GLY A:441 , PHE A:444 , HEM A:501 , CA A:507 , LYS B:103binding site for residue HEM A 502
03AC3SOFTWAREHIS A:207 , HIS A:257 , HIS A:258 , PEO A:505binding site for residue CU A 503
04AC4SOFTWAREALA A:124 , LEU A:126 , ASP A:131 , ASN A:179binding site for residue CA A 504
05AC5SOFTWAREHIS A:207 , VAL A:210 , HIS A:258 , HEM A:501 , CU A:503binding site for residue PEO A 505
06AC6SOFTWAREMET A:273 , ILE A:329 , LYS A:330 , THR A:331 , TYR C:72binding site for residue PO4 A 506
07AC7SOFTWAREARG A:57 , GLU A:122 , HEM A:501 , HEM A:502 , SER B:102binding site for residue CA A 507
08AC8SOFTWAREPHE A:53 , LEU A:427 , GLU B:63 , CYS B:65 , CYS B:68 , HIS B:69 , THR B:105 , GLY B:106 , PRO B:107 , LEU B:109 , TYR B:116 , HIS B:121 , HIS B:124 , LEU B:125 , VAL B:132 , SER B:135 , LYS B:136 , MET B:137 , PRO B:138 , TYR B:140 , MET B:188binding site for residue HEC B 301
09AC9SOFTWAREARG C:166 , ALA C:184 , ALA C:185 , MET C:186 , PRO C:187 , TRP C:189 , THR C:232 , CYS C:233 , CYS C:236 , HIS C:237 , LEU C:247 , GLY C:248 , PRO C:250 , TRP C:258 , ILE C:259 , TYR C:260 , LEU C:267 , THR C:270 , ILE C:271 , GLY C:277 , HEC C:402 , ILE I:183binding site for residue HEC C 401
10AD1SOFTWARETYR B:116 , TYR C:142 , CYS C:143 , CYS C:146 , HIS C:147 , GLY C:156 , PHE C:157 , PRO C:158 , LEU C:160 , TRP C:165 , ARG C:166 , TRP C:167 , ILE C:174 , SER C:177 , ILE C:178 , ALA C:184 , GLY C:277 , GLN C:278 , MET C:279 , PRO C:280 , GLN C:282 , HEC C:401binding site for residue HEC C 402
11AD2SOFTWAREGLY C:265 , GLN C:266 , GLN C:269 , ARG C:275 , ARG M:206 , PRO M:215 , SER M:263 , LEU M:264binding site for residue FC6 C 403
12AD3SOFTWAREGLU D:122 , TYR D:123 , TRP D:203 , VAL D:210 , TYR D:251 , HIS D:257 , HIS D:258 , LEU D:279 , SER D:283 , SER D:320 , GLY D:324 , PRO D:325 , MET D:327 , ALA D:328 , ASN D:333 , HIS D:337 , HIS D:345 , VAL D:346 , HEM D:502 , PEO D:506 , CA D:507 , SER E:102binding site for residue HEM D 501
13AD4SOFTWAREMET D:29 , GLY D:32 , VAL D:33 , ALA D:36 , ARG D:57 , HIS D:60 , VAL D:64 , ILE D:65 , GLU D:122 , TYR D:123 , ASP D:340 , ILE D:343 , VAL D:346 , HIS D:347 , ALA D:350 , LEU D:351 , TYR D:395 , ARG D:437 , GLY D:441 , PHE D:444 , HEM D:501 , CA D:507 , LYS E:103binding site for residue HEM D 502
14AD5SOFTWAREHIS D:207 , HIS D:257 , HIS D:258 , PEO D:506binding site for residue CU D 503
15AD6SOFTWARESER D:119 , ALA D:124 , LEU D:126 , ASP D:131 , ASN D:179binding site for residue CA D 504
16AD7SOFTWAREMET D:273 , ILE D:329 , LYS D:330 , THR D:331 , TYR F:72binding site for residue PO4 D 505
17AD8SOFTWAREHIS D:207 , VAL D:210 , HIS D:258 , HEM D:501 , CU D:503binding site for residue PEO D 506
18AD9SOFTWAREARG D:57 , GLU D:122 , HEM D:501 , HEM D:502 , SER E:102binding site for residue CA D 507
19AE1SOFTWARETYR F:260 , GLY F:265 , GLN F:266 , GLN F:269 , ARG F:275 , ARG I:206 , PRO I:215 , SER I:263 , LEU I:264binding site for residue FC6 F 403
20AE2SOFTWAREGLU G:122 , TYR G:123 , TRP G:203 , VAL G:210 , TYR G:251 , HIS G:257 , HIS G:258 , LEU G:279 , SER G:283 , SER G:320 , GLY G:324 , PRO G:325 , MET G:327 , ALA G:328 , ASN G:333 , HIS G:337 , HIS G:345 , VAL G:346 , HEM G:502 , PEO G:505 , CA G:507 , SER H:102binding site for residue HEM G 501
21AE3SOFTWAREMET G:29 , GLY G:32 , VAL G:33 , ILE G:35 , ALA G:36 , ARG G:57 , HIS G:60 , VAL G:64 , ILE G:65 , GLU G:122 , TYR G:123 , ASP G:340 , THR G:342 , ILE G:343 , VAL G:346 , HIS G:347 , ALA G:350 , LEU G:351 , TYR G:395 , ARG G:437 , GLY G:441 , PHE G:444 , HEM G:501 , CA G:507 , LYS H:103binding site for residue HEM G 502
22AE4SOFTWAREHIS G:207 , HIS G:257 , HIS G:258 , PEO G:505binding site for residue CU G 503
23AE5SOFTWARESER G:119 , ALA G:124 , LEU G:126 , ASP G:131 , ASN G:179binding site for residue CA G 504
24AE6SOFTWAREHIS G:207 , VAL G:210 , HIS G:258 , HEM G:501 , CU G:503binding site for residue PEO G 505
25AE7SOFTWAREMET G:273 , ILE G:329 , LYS G:330 , THR G:331 , TYR I:72binding site for residue PO4 G 506
26AE8SOFTWAREARG G:57 , GLU G:122 , HEM G:501 , HEM G:502 , SER H:102binding site for residue CA G 507
27AE9SOFTWAREARG F:206 , PRO F:215 , SER F:263 , LEU F:264 , GLY I:265 , GLN I:266 , GLN I:269 , ARG I:275binding site for residue FC6 I 401
28AF1SOFTWAREGLU K:122 , TYR K:123 , TRP K:203 , VAL K:210 , LEU K:214 , HIS K:257 , LEU K:279 , SER K:283 , SER K:320 , GLY K:324 , PRO K:325 , MET K:327 , ALA K:328 , ASN K:333 , HIS K:337 , THR K:342 , HIS K:345 , VAL K:346 , GLY K:349 , HEM K:502 , CU K:503 , CA K:504 , PEO K:507 , SER L:102binding site for residue HEM K 501
29AF2SOFTWAREMET K:29 , GLY K:32 , VAL K:33 , ILE K:35 , ALA K:36 , LEU K:39 , ARG K:57 , HIS K:60 , THR K:61 , VAL K:64 , ILE K:65 , GLU K:122 , TYR K:123 , ASP K:340 , ILE K:343 , VAL K:346 , HIS K:347 , ALA K:350 , LEU K:351 , TYR K:395 , ARG K:437 , GLY K:441 , PHE K:444 , HEM K:501 , CA K:504 , LYS L:103binding site for residue HEM K 502
30AF3SOFTWAREHIS K:207 , HIS K:257 , HIS K:258 , HEM K:501 , PEO K:507binding site for residue CU K 503
31AF4SOFTWAREARG K:57 , GLU K:122 , HEM K:501 , HEM K:502 , SER L:102binding site for residue CA K 504
32AF5SOFTWAREALA K:124 , LEU K:126 , ASP K:131 , ASN K:179binding site for residue CA K 505
33AF6SOFTWAREMET K:273 , ILE K:329 , LYS K:330 , THR K:331 , TYR M:72binding site for residue PO4 K 506
34AF7SOFTWAREHIS K:207 , VAL K:210 , HIS K:258 , HEM K:501 , CU K:503binding site for residue PEO K 507
35AF8SOFTWAREARG C:206 , PRO C:215 , SER C:263 , LEU C:264 , GLY M:265 , GLN M:266 , GLN M:269 , ARG M:275binding site for residue FC6 M 401
36AF9SOFTWAREPHE D:53 , LEU D:427 , TYR E:60 , GLU E:63 , GLY E:64 , VAL E:66 , GLY E:67 , CYS E:68 , HIS E:69 , THR E:105 , GLY E:106 , PRO E:107 , LEU E:109 , TYR E:116 , TRP E:120 , HIS E:121 , HIS E:124 , LEU E:125 , VAL E:132 , SER E:135 , MET E:137 , PRO E:138 , TYR E:140 , MET E:188 , ILE F:145binding site for Di-peptide HEC E 301 and CYS E 65
37AG1SOFTWAREPHE D:53 , LEU D:427 , GLU E:63 , CYS E:65 , VAL E:66 , GLY E:67 , HIS E:69 , LYS E:103 , ARG E:104 , THR E:105 , GLY E:106 , PRO E:107 , LEU E:109 , TYR E:116 , TRP E:120 , HIS E:121 , HIS E:124 , LEU E:125 , VAL E:132 , SER E:135 , MET E:137 , PRO E:138 , TYR E:140 , MET E:188 , ILE F:145binding site for Di-peptide HEC E 301 and CYS E 68
38AG2SOFTWAREARG F:166 , ALA F:184 , ALA F:185 , MET F:186 , PRO F:187 , TRP F:189 , TYR F:229 , THR F:232 , ALA F:234 , VAL F:235 , CYS F:236 , HIS F:237 , LEU F:247 , GLY F:248 , ALA F:249 , PRO F:250 , TRP F:258 , ILE F:259 , TYR F:260 , LEU F:267 , THR F:270 , ILE F:271 , GLY F:277 , HEC F:402binding site for Di-peptide HEC F 401 and CYS F 233
39AG3SOFTWAREARG F:166 , ALA F:184 , ALA F:185 , MET F:186 , PRO F:187 , TRP F:189 , THR F:232 , CYS F:233 , ALA F:234 , VAL F:235 , HIS F:237 , GLY F:238 , MET F:244 , LEU F:247 , GLY F:248 , ALA F:249 , PRO F:250 , TRP F:258 , ILE F:259 , TYR F:260 , LEU F:267 , THR F:270 , ILE F:271 , GLY F:277 , HEC F:402binding site for Di-peptide HEC F 401 and CYS F 236
40AG4SOFTWARETYR E:116 , SER E:117 , PHE F:139 , TYR F:142 , SER F:144 , ILE F:145 , CYS F:146 , HIS F:147 , GLY F:156 , PRO F:158 , LEU F:160 , TRP F:165 , ARG F:166 , TRP F:167 , SER F:177 , ILE F:178 , ALA F:184 , GLY F:277 , GLN F:278 , MET F:279 , PRO F:280 , GLN F:282 , HEC F:401binding site for Di-peptide HEC F 402 and CYS F 143
41AG5SOFTWARETYR E:116 , SER E:117 , CYS F:143 , SER F:144 , ILE F:145 , HIS F:147 , GLY F:148 , GLY F:156 , PHE F:157 , PRO F:158 , LEU F:160 , TRP F:165 , ARG F:166 , TRP F:167 , SER F:177 , ILE F:178 , ALA F:184 , GLY F:277 , GLN F:278 , MET F:279 , PRO F:280 , GLN F:282 , HEC F:401binding site for Di-peptide HEC F 402 and CYS F 146
42AG6SOFTWAREPHE G:53 , LEU G:427 , GLU H:63 , CYS H:65 , VAL H:66 , GLY H:67 , HIS H:69 , LYS H:103 , ARG H:104 , THR H:105 , GLY H:106 , PRO H:107 , LEU H:109 , TYR H:116 , TRP H:120 , HIS H:121 , HIS H:124 , LEU H:125 , VAL H:132 , SER H:135 , LYS H:136 , MET H:137 , PRO H:138 , TYR H:140 , MET H:188 , ILE I:145binding site for Di-peptide HEC H 301 and CYS H 68
43AG7SOFTWAREPHE G:53 , LEU G:427 , TYR H:60 , GLU H:63 , GLY H:64 , VAL H:66 , GLY H:67 , CYS H:68 , HIS H:69 , THR H:105 , GLY H:106 , PRO H:107 , LEU H:109 , TYR H:116 , TRP H:120 , HIS H:121 , HIS H:124 , LEU H:125 , VAL H:132 , SER H:135 , LYS H:136 , MET H:137 , PRO H:138 , TYR H:140 , MET H:188 , ILE I:145binding site for Di-peptide HEC H 301 and CYS H 65
44AG8SOFTWAREILE C:183 , ARG I:166 , ALA I:184 , ALA I:185 , MET I:186 , PRO I:187 , TRP I:189 , TYR I:229 , THR I:232 , ALA I:234 , VAL I:235 , CYS I:236 , HIS I:237 , LEU I:247 , GLY I:248 , PRO I:250 , LEU I:252 , TRP I:258 , ILE I:259 , TYR I:260 , GLY I:261 , LEU I:267 , THR I:270 , ILE I:271 , GLY I:277 , HEC I:403binding site for Di-peptide HEC I 402 and CYS I 233
45AG9SOFTWAREILE C:183 , ARG I:166 , ALA I:184 , ALA I:185 , MET I:186 , PRO I:187 , TRP I:189 , THR I:232 , CYS I:233 , ALA I:234 , VAL I:235 , HIS I:237 , GLY I:238 , MET I:244 , LEU I:247 , GLY I:248 , ALA I:249 , PRO I:250 , LEU I:252 , TRP I:258 , ILE I:259 , TYR I:260 , GLY I:261 , LEU I:267 , THR I:270 , ILE I:271 , GLY I:277 , HEC I:403binding site for Di-peptide HEC I 402 and CYS I 236
46AH1SOFTWARETYR H:116 , TRP H:120 , TYR I:142 , CYS I:143 , SER I:144 , ILE I:145 , HIS I:147 , GLY I:148 , GLY I:156 , PHE I:157 , PRO I:158 , TRP I:165 , ARG I:166 , TRP I:167 , ILE I:174 , SER I:177 , ILE I:178 , ALA I:184 , GLY I:277 , GLN I:278 , MET I:279 , PRO I:280 , GLN I:282 , HEC I:402binding site for Di-peptide HEC I 403 and CYS I 146
47AH2SOFTWARETYR H:116 , PHE I:139 , TYR I:142 , SER I:144 , ILE I:145 , CYS I:146 , HIS I:147 , GLY I:156 , PRO I:158 , TRP I:165 , ARG I:166 , TRP I:167 , ILE I:174 , SER I:177 , ILE I:178 , ALA I:184 , GLY I:277 , GLN I:278 , MET I:279 , PRO I:280 , GLN I:282 , HEC I:402binding site for Di-peptide HEC I 403 and CYS I 143
48AH3SOFTWAREPHE K:53 , LEU K:427 , GLU L:63 , CYS L:65 , VAL L:66 , GLY L:67 , HIS L:69 , LYS L:103 , ARG L:104 , THR L:105 , GLY L:106 , PRO L:107 , TYR L:116 , TRP L:120 , HIS L:121 , HIS L:124 , VAL L:132 , SER L:135 , MET L:137 , PRO L:138 , TYR L:140 , MET L:188binding site for Di-peptide HEC L 301 and CYS L 68
49AH4SOFTWAREPHE K:53 , LEU K:427 , TYR L:60 , GLU L:63 , GLY L:64 , VAL L:66 , GLY L:67 , CYS L:68 , HIS L:69 , THR L:105 , GLY L:106 , PRO L:107 , TYR L:116 , TRP L:120 , HIS L:121 , HIS L:124 , VAL L:132 , SER L:135 , MET L:137 , PRO L:138 , TYR L:140 , MET L:188binding site for Di-peptide HEC L 301 and CYS L 65
50AH5SOFTWAREARG M:166 , ILE M:183 , ALA M:184 , ALA M:185 , MET M:186 , PRO M:187 , TRP M:189 , VAL M:205 , TYR M:229 , THR M:232 , ALA M:234 , VAL M:235 , CYS M:236 , HIS M:237 , LEU M:247 , GLY M:248 , PRO M:250 , LEU M:252 , TRP M:258 , ILE M:259 , TYR M:260 , GLY M:261 , LEU M:267 , THR M:270 , ILE M:271 , GLY M:277 , HEC M:403binding site for Di-peptide HEC M 402 and CYS M 233
51AH6SOFTWAREARG M:166 , ILE M:183 , ALA M:184 , ALA M:185 , MET M:186 , PRO M:187 , TRP M:189 , VAL M:205 , THR M:232 , CYS M:233 , ALA M:234 , VAL M:235 , HIS M:237 , GLY M:238 , MET M:244 , LEU M:247 , GLY M:248 , ALA M:249 , PRO M:250 , LEU M:252 , TRP M:258 , ILE M:259 , TYR M:260 , GLY M:261 , LEU M:267 , THR M:270 , ILE M:271 , GLY M:277 , HEC M:403binding site for Di-peptide HEC M 402 and CYS M 236
52AH7SOFTWARETYR L:116 , TYR M:142 , CYS M:143 , SER M:144 , ILE M:145 , HIS M:147 , GLY M:148 , GLY M:156 , PHE M:157 , PRO M:158 , LEU M:160 , TRP M:165 , ARG M:166 , TRP M:167 , ILE M:174 , SER M:177 , ILE M:178 , ALA M:184 , GLY M:277 , GLN M:278 , MET M:279 , PRO M:280 , GLN M:282 , HEC M:402binding site for Di-peptide HEC M 403 and CYS M 146
53AH8SOFTWARETYR L:116 , PHE M:139 , TYR M:142 , SER M:144 , ILE M:145 , CYS M:146 , HIS M:147 , GLY M:156 , PRO M:158 , LEU M:160 , TRP M:165 , ARG M:166 , TRP M:167 , ILE M:174 , SER M:177 , ILE M:178 , ALA M:184 , GLY M:277 , GLN M:278 , MET M:279 , PRO M:280 , GLN M:282 , HEC M:402binding site for Di-peptide HEC M 403 and CYS M 143

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5DJQ)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1His B:96 -Pro B:97
2His E:96 -Pro E:97
3His H:96 -Pro H:97
4His L:96 -Pro L:97

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5DJQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5DJQ)

(-) Exons   (0, 0)

(no "Exon" information available for 5DJQ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:466
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeee..eeee..hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq A   5 TSTAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAELEWPIDILITIVWVAYAVVFFGTLAKRKVKHIYVGNWFFGAFILTVAILHVVNNLEIPVTAMKSYSLYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHFWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLVPKVFGREQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYDAA 470
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464      


Chain B from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhh........................hhhhhhhhhhhhhhhh........hhhhhh.....hhhhhhhhhhhh....hhhhhh.........hhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq B   6 KLEKNVGLLTLFMILAVSIGGLTQIVPLFFQDSVNEPVEGMKPYTALQLEGRDLYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPSYPWLVENTLDGKDTAKKMSALRMLGVPYTEEDIAGARDSVNGKTEMDAMVAYLQVLGTALTNK 202
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       


Chain C from PDB  Type:PROTEIN  Length:303
                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhee.....hhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhh...............hhhhh....hhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq C   1 MSTFWSGYIALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVLYPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDAKGSLGFPNLADQDWRWGGDAASIKTSILNGRIAAMPAWGQAIGEEGVKNVAAFVRKDLAGLPLPEGTDADLSAGKNVYAQTCAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHGRNGQMPAQQQYLGDDKVHLLAAYVYSLSQ 303
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300   


Chain D from PDB  Type:PROTEIN  Length:463
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeee..eeee..hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq D   8 AYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAELEWPIDILITIVWVAYAVVFFGTLAKRKVKHIYVGNWFFGAFILTVAILHVVNNLEIPVTAMKSYSLYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHFWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLVPKVFGREQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYDAA 470
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467   


Chain E from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhhh.......................hhhhhhhhhhhhhhhh........hhhhhh.....hhhhhhhhhhhh....hhhhhh.........hhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq E   6 KLEKNVGLLTLFMILAVSIGGLTQIVPLFFQDSVNEPVEGMKPYTALQLEGRDLYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPSYPWLVENTLDGKDTAKKMSALRMLGVPYTEEDIAGARDSVNGKTEMDAMVAYLQVLGTALTNK 202
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       


Chain F from PDB  Type:PROTEIN  Length:303
                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.........................hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhee.....hhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhh...............hhhhh....hhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq F   1 MSTFWSGYIALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVLYPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDAKGSLGFPNLADQDWRWGGDAASIKTSILNGRIAAMPAWGQAIGEEGVKNVAAFVRKDLAGLPLPEGTDADLSAGKNVYAQTCAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHGRNGQMPAQQQYLGDDKVHLLAAYVYSLSQ 303
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300   


Chain G from PDB  Type:PROTEIN  Length:465
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeee..eeee..hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq G   6 STAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAELEWPIDILITIVWVAYAVVFFGTLAKRKVKHIYVGNWFFGAFILTVAILHVVNNLEIPVTAMKSYSLYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHFWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLVPKVFGREQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYDAA 470
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465     


Chain H from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhh........................hhhhhhhhhhhhhhhh........hhhhhh.....hhhhhhhhhhhh....hhhhhh.........hhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq H   6 KLEKNVGLLTLFMILAVSIGGLTQIVPLFFQDSVNEPVEGMKPYTALQLEGRDLYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPSYPWLVENTLDGKDTAKKMSALRMLGVPYTEEDIAGARDSVNGKTEMDAMVAYLQVLGTALTNK 202
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       


Chain I from PDB  Type:PROTEIN  Length:303
                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.........................hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhee.....hhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhh...............hhhhh....hhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq I   1 MSTFWSGYIALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVLYPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDAKGSLGFPNLADQDWRWGGDAASIKTSILNGRIAAMPAWGQAIGEEGVKNVAAFVRKDLAGLPLPEGTDADLSAGKNVYAQTCAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHGRNGQMPAQQQYLGDDKVHLLAAYVYSLSQ 303
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300   


Chain K from PDB  Type:PROTEIN  Length:465
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeee..eeee..hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq K   6 STAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAELEWPIDILITIVWVAYAVVFFGTLAKRKVKHIYVGNWFFGAFILTVAILHVVNNLEIPVTAMKSYSLYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHFWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLVPKVFGREQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYDAA 470
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465     


Chain L from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhh........................hhhhhhhhhhhhhhhh........hhhhhh.....hhhhhhhhhhhh....hhhhhh.........hhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq L   6 KLEKNVGLLTLFMILAVSIGGLTQIVPLFFQDSVNEPVEGMKPYTALQLEGRDLYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPSYPWLVENTLDGKDTAKKMSALRMLGVPYTEEDIAGARDSVNGKTEMDAMVAYLQVLGTALTNK 202
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       


Chain M from PDB  Type:PROTEIN  Length:303
                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee..ee......hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhee.....hhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhh...............hhhhh....hhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djq M   1 MSTFWSGYIALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVLYPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDAKGSLGFPNLADQDWRWGGDAASIKTSILNGRIAAMPAWGQAIGEEGVKNVAAFVRKDLAGLPLPEGTDADLSAGKNVYAQTCAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHGRNGQMPAQQQYLGDDKVHLLAAYVYSLSQ 303
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300   


Chain N from PDB  Type:PROTEIN  Length:29
                                                             
               SCOP domains ----------------------------- SCOP domains
               CATH domains ----------------------------- CATH domains
               Pfam domains ----------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------- SAPs(SNPs)
                    PROSITE ----------------------------- PROSITE
                 Transcript ----------------------------- Transcript
                 5djq N   1 MFVDNVVLAGVVTVGLMVAFLAGFGYFIW  29
                                    10        20         


Chain O from PDB  Type:PROTEIN  Length:29
                                                             
               SCOP domains ----------------------------- SCOP domains
               CATH domains ----------------------------- CATH domains
               Pfam domains ----------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------- SAPs(SNPs)
                    PROSITE ----------------------------- PROSITE
                 Transcript ----------------------------- Transcript
                 5djq O   1 MFVDNVVLAGVVTVGLMVAFLAGFGYFIW  29
                                    10        20         


Chain P from PDB  Type:PROTEIN  Length:29
                                                             
               SCOP domains ----------------------------- SCOP domains
               CATH domains ----------------------------- CATH domains
               Pfam domains ----------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------- SAPs(SNPs)
                    PROSITE ----------------------------- PROSITE
                 Transcript ----------------------------- Transcript
                 5djq P   1 MFVDNVVLAGVVTVGLMVAFLAGFGYFIW  29
                                    10        20         


Chain Q from PDB  Type:PROTEIN  Length:29
                                                             
               SCOP domains ----------------------------- SCOP domains
               CATH domains ----------------------------- CATH domains
               Pfam domains ----------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------- SAPs(SNPs)
                    PROSITE ----------------------------- PROSITE
                 Transcript ----------------------------- Transcript
                 5djq Q   1 MFVDNVVLAGVVTVGLMVAFLAGFGYFIW  29
                                    10        20
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5DJQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5DJQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5DJQ)

(-) Gene Ontology  (28, 52)

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(-) Related Entries Specified in the PDB File

3mk7 DURING THE DETERMINATION OF THE STRUCTURE OF CBB3 CYTOCHROME OXIDASE (3MK7) AN ADDITIONAL HELIX OF UNKNOWN SEQUENCE WAS FOUND. THE SEQUENCE OF THIS HELIX WAS THEN IDENTIFIED AND NOW THE COMPLETED MODEL IS READY FOR DEPOSITION. EVERYTHING REMAINS UNCHANGED EXCEPT FOR THE IMPROVED AND UPDATED MODEL AND CORRESPONDINGLY CHANGED PHASES, THE USED PROGRAM, THE CONTRIBUTING AUTHORS, AND THE NEW CITATION.