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(-) Description

Title :  STRUCTURE OF M. TUBERCULOSIS CYSQ, A PAP PHOSPHATASE - LIGAND-FREE STRUCTURE
 
Authors :  A. I. Erickson, A. J. Fisher
Date :  02 Sep 15  (Deposition) - 11 Nov 15  (Release) - 02 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Cysq, Pap Phosphatase, Apo-Enzyme, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. I. Erickson, R. D. Sarsam, A. J. Fisher
Crystal Structures Of Mycobacterium Tuberculosis Cysq, With Substrate And Products Bound.
Biochemistry V. 54 6830 2015
PubMed-ID: 26512869  |  Reference-DOI: 10.1021/ACS.BIOCHEM.5B01000

(-) Compounds

Molecule 1 - 3'-PHOSPHOADENOSINE 5'-PHOSPHATE PHOSPHATASE
    Chains: A
    EC Number: 3.1.3.7, 3.1.3.11, 3.1.3.25
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET28B
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CYSQ, MT2189
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 1773
    Synonym: CYSQ, PAP PHOSPHATASE, 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE, 5-BISPHOSPHONUCLEOSIDE 3'(2')-PHOSPHOHYDROLASE, D-FRUCTOSE-1,6- BISPHOSPHATE 1-PHOSPHOHYDROLASE, DPNPASE, FRUCTOSE-1,6- BISPHOSPHATASE, FBPASE, INOSITOL-1-MONOPHOSPHATASE,IMPASE, INOSITOL- 1-PHOSPHATASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2NA1Ligand/IonSODIUM ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:50 , GLU A:73 , ASP A:91 , LEU A:93 , HOH A:556binding site for residue NA A 301
2AC2SOFTWAREASP A:25 , GLN A:32 , LEU A:56 , SER A:84 , ASP A:85 , HOH A:439binding site for residue GOL A 302
3AC3SOFTWAREPRO A:166 , ASP A:196 , TYR A:198 , HOH A:413 , HOH A:417binding site for residue GOL A 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5DJF)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5DJF)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5DJF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5DJF)

(-) Exons   (0, 0)

(no "Exon" information available for 5DJF)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:266
                                                                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...eeee......hhhhhh.eeeeeeeeehhhhhh.......eeeeeeee........eeeeeeee.....eeee................eeeee.....hhhhhhhh....eeeee..hhhhhhhhhhh....eeee...ee...hhhhhhhhhhh..eee..............ee..eeee...hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5djf A -18 SHHHHHHSTDDLTDAELAADLAADAGKLLLQVRAEIGFDQPWTLGEAGDRQANSLLLRRLQAERPGDAVLSEEAHDDLARLKSDRVWIIDPLDGTREFSTPGRDDWAVHIALWRRSSNGQPEITDAAVALPARGNVVYRTDTVTSGAAPAGVPGTLRIAVSATRPPAVLHRIRQTLAIQPVSIGSAGAKAMAVIDGYVDAYLHAGGQWEWDSAAPAGVMLAAGMHASRLDGSPLRYNQLDPYLPDLLMCRAEVAPILLGAIADAWR 267
                                   |11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261      
                                 -11|                                                                                                                                                                                                                                                                 
                                   10
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5DJF)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5DJF)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5DJF)

(-) Gene Ontology  (22, 32)

Asymmetric/Biological Unit(hide GO term definitions)

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  5djf
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  CYSQ_MYCTO | P9WKJ0
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  CYSQ_MYCTU | P9WKJ1
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  3.1.3.11
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CYSQ_MYCTO | P9WKJ0: 5djg 5djh 5dji 5djj 5djk
        CYSQ_MYCTU | P9WKJ1: 5djg 5djh 5dji 5djj 5djk

(-) Related Entries Specified in the PDB File

5djg 5djh 5dji 5djj 5djk