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(-) Description

Title :  STRUCTURE OF S. CEREVISIAE HRR25:MAM1 COMPLEX, FORM 1
 
Authors :  Q. Ye, K. D. Corbett
Date :  31 Jul 15  (Deposition) - 03 Aug 16  (Release) - 07 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.84
Chains :  Asym./Biol. Unit :  A,C
Keywords :  Casein Kinase, Monopolin, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Q. Ye, S. N. Ur, T. Y. Su, K. D. Corbett
Structure Of The Saccharomyces Cerevisiae Hrr25:Mam1 Monopolin Subcomplex Reveals A Novel Kinase Regulator.
Embo J. V. 35 2139 2016
PubMed-ID: 27491543  |  Reference-DOI: 10.15252/EMBJ.201694082

(-) Compounds

Molecule 1 - CASEIN KINASE I HOMOLOG HRR25
    Chains: A
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: HRR25, YPL204W
    Mutation: YES
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Other Details: SURFACE LYS RESIDUES METHYLATED (MLY)
    Strain: ATCC 204508 / S288C
 
Molecule 2 - MONOPOLIN COMPLEX SUBUNIT MAM1
    Chains: C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MAM1, YER106W
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Other Details: SURFACE LYS RESIDUES METHYLATED (MLY)
    Strain: ATCC 204508 / S288C
    Synonym: MONOPOLAR MICROTUBULE ATTACHMENT DURING MEIOSIS 1 PROTEIN 1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 20)

Asymmetric/Biological Unit (2, 20)
No.NameCountTypeFull Name
1MLY19Mod. Amino AcidN-DIMETHYL-LYSINE
2ZN1Ligand/IonZINC ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS C:114 , HIS C:116 , CYS C:119 , CYS C:152binding site for residue ZN C 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5CYZ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5CYZ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5CYZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5CYZ)

(-) Exons   (0, 0)

(no "Exon" information available for 5CYZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:369
                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee...eeeeeeeee....eeeeeee.....eeeeeeee......hhhhhhhhhhhh........eeeeeee..eeeeeee.eeeehhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eeee.hhhh..eee......ee....................hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhh...hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5cyz A   0 AMDLRVGRkFRIGRkIGSGSFGDIYHGTNLISGEEVAIRLESIRSRHPQLDYESRVYRYLSGGVGIPFIRWFGREGEYNAMVIDLLGPSLEDLFNYCHRRFSFKTVIMLALQMFCRIQYIHGRSFIHRDIkPDNFLMGVGRRGSTVHVIDFGLSkkYRDFNTHRHIPYRENkSLTGTARYASVNTHLGIEQSRRDDLESLGYVLIYFCKGSLPWQGLKATTKkQKYDRIMEkKLNVSVETLCSGLPLEFQEYMAYCkNLKFDEkPDYLFLARLFkDLSIkLEYHNDHLFDWTMLRYTKAMVEKQRDLLIKSETFNkIkLLAMKKFPTHFHYYkNEDKHNPSPEEIkQQTILNNNAASSLPEELLNALDK 388
                                    |9    |   19        29        39        49        59        69        79        89        99       109       119       129|      139       149    || 159       169 |     179       189       199       209       219  |    229 |     239       249      |259   |   269    |  279       289       299       329     | 339       349  |    359     | 369       379         
                                    8-MLY |                                                                                                                 130-MLY                 154-MLY          171-MLY                                            222-MLY  231-MLY                  256-MLY  |        274-MLY|                          308|     | |            352-MLY      365-MLY                   
                                         14-MLY                                                                                                                                      155-MLY                                                                                                     263-MLY         279-MLY                       329     | |                                                   
                                                                                                                                                                                                                                                                                                                                                     335-MLY                                                 
                                                                                                                                                                                                                                                                                                                                                       337-MLY                                               


Chain C from PDB  Type:PROTEIN  Length:102
                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhh........hhhhhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhh......hhhhh.........hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 5cyz C  90 ECLTRSNLKkLQEKIFDRELNDIACDHCLCSTENRRDIKYSRLWFLFELEMSENWNENLRLSCYNkYVYSAIDESWKMENILLKEQEkHYEYFPIGQLLIPN 191
                                    99       109       119       129       139       149     | 159       169       179       189  
                                    99-MLY                                                 155-MLY               177-MLY
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CYZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5CYZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5CYZ)

(-) Gene Ontology  (45, 48)

Asymmetric/Biological Unit(hide GO term definitions)

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  HRR25_YEAST | P29295
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  MAM1_YEAST | P40065
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HRR25_YEAST | P29295: 4xhl 5czo
        MAM1_YEAST | P40065: 5czo 5ktb

(-) Related Entries Specified in the PDB File

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