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(-)Asym./Biol. Unit
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(-) Description

Title :  CONDENSING DI-DOMAIN (KS-AT) OF A MYCOCEROSIC ACID SYNTHASE-LIKE (MAS-LIKE) PKS
 
Authors :  R. P. Jakob, D. A. Herbst, F. Zaehringer, T. Maier
Date :  27 May 15  (Deposition) - 09 Mar 16  (Release) - 28 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Polyketide, Ketosynthase, Acyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. A. Herbst, R. P. Jakob, F. Zahringer, T. Maier
Mycocerosic Acid Synthase Exemplifies The Architecture Of Reducing Polyketide Synthases.
Nature V. 531 533 2016
PubMed-ID: 26976449  |  Reference-DOI: 10.1038/NATURE16993

(-) Compounds

Molecule 1 - MYCOCEROSIC ACID SYNTHASE
    Chains: A
    EC Number: 2.3.1.111
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PNIC28-BSA4
    Expression System Taxid: 469008
    Expression System Variant: PRIL
    Expression System Vector Type: PLASMID
    Gene: MSMEG_4727, LJ00_23385
    Organism Scientific: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / MC(2)155)
    Organism Taxid: 246196
    Strain: ATCC 700084 / MC(2)155

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5BP1)

(-) Sites  (0, 0)

(no "Site" information available for 5BP1)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5BP1)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5BP1)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5BP1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5BP1)

(-) Exons   (0, 0)

(no "Exon" information available for 5BP1)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:817
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeeee......hhhhhhhhhhhh....ee......ee.......ee.hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh...eeeeeee......hhhhhhhhhhhh....eeeee......hhhhhhhhhhhhh....eeeeeeee...........................eeeeeeeeehhhhhhhh....eeeeeeeeee......hhhhhhhhhhhhh.hhh.eeeee........hhhhhhhhhhhhh......eee.hhhhhh.hhhhhhhhhhhhhhhhhhh.ee.........hhhhhh...........ee.........eeeeeee....eeeeeeeee..........eeeeeee.hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhh.....ee.........eeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh........hhhhhhhhhhhhhhhhhhh......eeee..hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhh....eeeeeeee..eeeeeehhhhhhhhhhhhhh....eeee.......hhhhhhhhhhhhhhh...........ee.............hhhhhhhhhhh..hhhhhhhhhhhh...eeee......hhhhhhhhhhhh....eeee...........hhhhhhhhhhhh...hhhhhh...............ee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5bp1 A   4 NCVAPVAIIGMACRLPGAINSPQQLWEALLRGDDFVTEIPTGRKWGAFLDDPAAFDPEFFGITEREAAAIDPQHRLLLETAWEAVEHSGLNPAGLAGSATGVFMGLTHNTSFSLASGRIAYALGVHGPAITVDTACSSSLSAIHMACRSLHDGESDVALAGGVSVLLEGMLSPTGHCHAFDTAADGFVSAEGCVVLTLKRLDDAVADGDRILAVIRGTATNQDGSADAQAKVYRMALKAAGVEPGTVGLVEAHGTGTPVGDPLEFSSLAEVYGTDGPCALGSIKTNFGHTQSAAGALGVMKAVLALQHNVIPQNLHFTRLPDQMAEIETGLFVPETITPWPVREGQPRRAAVSAYGLSGTNVHAVLEQAPESPKAGNALVFPVSASSADALRSTAQHLADWLLRSGDGNGRGPAIDLGDLAYTLARRRGFRAARSAVLAGDRGTLVEGLRQIADGEAMPQQAVTNDDRGPVWVFSGQGSQWASMGAELLDREPAFAAAIAELEPLIAAESDFSVTEALTASETVTGIDRVQPTIFAVQVALAAAMRSHGVVPGAVIGHSMGEVAASVVSGALSLEDGVKVICRRTRLMTRIAGSGAMAMVELPAQQVLSELASRGVDDVVLSVVASPQSTVVGGATASVRELIEMWESRGVMAREIAVDVASHSPQVDPILDDLIEALADLDPAEPEIPYYSATLYDPRDYADYDAYYWADNLRHTVRFSAAVQAALEDGHRVFAELSPHPLLTHPVEQTARSLDMPLAVFAAMRRQQEMPHGLLGFVADLHSAGAAVDFSVLYPTGRLLDAPLPAWTHSTLLLDRE 887
                                    13        23        33        43  ||    72        82        92       102       112       122       152       162       172       182       192       202       222       232       242       252       262       272   ||  290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  ||   450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       
                                                                     46|                                                              131|                                                       210|                                                    276|                                                                                                                                                 433|                                                                                                                                                                                                                                                                                                                                                                                                                                                           
                                                                      66                                                               152                                                        221                                                     285                                                                                                                                                  444
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5BP1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5BP1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5BP1)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 5bp1)
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PKS5_MYCS2 | A0R1E8: 5bp2 5bp3 5bp4

(-) Related Entries Specified in the PDB File

5bp2 5bp3 5bp4