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(-) Description

Title :  PERDEUTERATED MOUSE CNPASE CATALYTIC DOMAIN AT ATOMIC RESOLUTION
 
Authors :  S. Laulumaa, P. Kursula
Date :  25 Aug 15  (Deposition) - 25 Nov 15  (Release) - 25 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.04
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Raasakka, M. Myllykoski, S. Laulumaa, M. Lehtimaki, M. Hartlein, M. Moulin, I. Kursula, P. Kursula
Determinants Of Ligand Binding And Catalytic Activity In The Myelin Enzyme 2', 3'-Cyclic Nucleotide 3'- Phosphodiesterase.
Sci. Rep. V. 5 16520 2015
PubMed-ID: 26563764  |  Reference-DOI: 10.1038/SREP16520

(-) Compounds

Molecule 1 - 2', 3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE
    Chains: A
    EC Number: 3.1.4.37
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETNKI-HIS3C-LIC-KAN
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: ROSETTA
    Expression System Vector Type: PLASMID
    Fragment: CATALYTIC DOMAIN, UNP RESIDUES 179-398
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Other Details: PERDEUTERATED
    Synonym: CNP, CNPASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1CIT1Ligand/IonCITRIC ACID
2CL1Ligand/IonCHLORIDE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:195 , LYS A:196 , GLY A:344 , GLU A:345 , HOH A:2041 , HOH A:2044BINDING SITE FOR RESIDUE CIT A1379
2AC2SOFTWAREGLY A:305 , SER A:306 , ARG A:307 , HOH A:2130 , HOH A:2203 , HOH A:2204 , HOH A:2210BINDING SITE FOR RESIDUE CL A1380

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5AE0)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5AE0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5AE0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5AE0)

(-) Exons   (0, 0)

(no "Exon" information available for 5AE0)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhh........eeeeee.hhhh..hhhhhhhhhhhhhhh..eeeeeeeeeee...eeeeeee.hhhhhh........hhhhh........eeeeee......hhhhhhhhhhhhhhh........eee..eeeeeee..eeeeeeeeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ae0 A 162 KDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRHFISGDEPKEKLELVSYFGKRPPGVLHCTTKFCDYGKAAGAEEYAQQEVVKRSYGKAFKLSISALFVTPKTAGAQVVLTDQELQLWPSDLDKPSASEGLPPGSRAHVTLGCAADVQPVQTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLSLTKKMEVKAIFTGYYG 378
                                   171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5AE0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5AE0)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5AE0)

(-) Gene Ontology  (33, 33)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CN37_MOUSE | P16330: 2xmi 2y1p 2y3x 2ydb 2ydc 2ydd 2yoz 2yp0 2ypc 2ype 2yph 2yq9 3zbr 3zbs 3zbz 4wbi 4wbl 4wc9 4wca 4wcb 4wcc 4wda 4wdb 4wdd 4wde 4wdf 4wdg 4wdh 4wex 4wfr

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(no "Related Entries Specified in the PDB File" available for 5AE0)