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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF KELCH PROTEIN (WITH DISULFIDE BOND) FROM PLASMODIUM FALCIPARUM
 
Authors :  D. Q. Jiang, W. Tempel, P. Loppnau, S. Graslund, H. He, M. Ravichandran, A. Seitova, C. H. Arrowsmith, A. M. Edwards, C. Bountra, M. El Bakkour G. Senisterra, K. T. Osman, D. V. Lovato, R. Hui, A. Hutchinson, Y. H. Li Structural Genomics Consortium (Sgc)
Date :  22 Apr 15  (Deposition) - 10 Jun 15  (Release) - 22 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics Consortium, Sgc, Putative Kelch Protein, K13, Disulfide Bond, Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Q. Jiang, W. Tempel, P. Loppnau, S. Graslund, H. He, M. Ravichandran A. Seitova, C. H. Arrowsmith, A. M. Edwards, C. Bountra, R. Hui, M. El Bakkouri, G. Senisterra, K. T. Osman, D. V. Lovato, A. Hutchinson, Y. H. Lin
Crystal Structure Of Kelch Protein With Disulfide Bond From Plasmodium Falciparum.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - KELCH PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Plasmid: PFBOH-MH
    Expression System Strain: SF9
    Expression System Taxid: 7108
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 338-726
    Gene: PF13_0238
    Organism Scientific: PLASMODIUM FALCIPARUM
    Organism Taxid: 5833

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 36)

Asymmetric/Biological Unit (1, 36)
No.NameCountTypeFull Name
1UNX36Ligand/IonUNKNOWN ATOM OR ION

(-) Sites  (0, 0)

(no "Site" information available for 4ZGC)

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:532 -A:580
2B:532 -B:580

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ZGC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZGC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZGC)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZGC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:372
                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..eeee.hhhhhh....hhhhhh.........eee..hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh.......eeeee...........eeeee....eeee...........eeeee..eeeee............eeeee....eeee...........eeeee..eeeee...........eeeee....eeeee..........eeeee..eeeee..........eeeee.hhh.eee............eeeee..eeeee............eeeee....eeee...........eeee....eeee..........eeee......eee...........eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4zgc A 350 TMIDINVGGAIFETSRHTLTQQKDSFIEKLHVTRDKQGRIFLDRDSELFRIILNFLRNPLTIPIPKDLSESEALLKEAEFYGIKFLPFPLVFCIGGFDGVEYLNSMELLDISQQCWRMCTPMSTKKAYFGSAVLNNFLYVFGGNNYDYKALFETEVYDRLRDVWYVSSNLNIPRRNNCGVTSNGRIYCIGGYDGSSIIPNVEAYDHRMKAWVEVAPLNTPRSSAMCVAFDNKIYVIGGTNGERLNSIEVYEEKMNKWEQFPYALLEARSSGAAFNYLNQIYVVGGIDNEHNILDSVEQYQPFNKRWQFLNGVPEKKMNFGAATLSDSYIITGGENGEVLNSCHFFSPDTNEWQLGPSLLVPRFGHSVLIANI 726
                                   359       369       379|      394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724  
                                                       379|                                                                                                                                                                                                                                                                                                                                                     
                                                        385                                                                                                                                                                                                                                                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:373
                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeeehhhhhh....hhhhhhh.............eee..hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh.......eeeeeeee....eeeeeeeee....eeee...........eeeee..eeeee............eeeee....eeee...........eeeee..eeeee...........eeeee....eeeee..........eeeee..eeeee..........eeeeehhhheeee............eeeee..eeeeeeee.....eeeeeeeee....eeee...........eeee....eeee..........eeee...eee...........eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zgc B 351 MIDINVGGAIFETSRHTLTQQKDSFIEKLLSGRHHVTRDKQGRIFLDRDSELFRIILNFLRNPLTIPIPKDLSESEALLKEAEFYGIKFLPFPLVFCIGGFDGVEYLNSMELLDISQQCWRMCTPMSTKKAYFGSAVLNNFLYVFGGNNYDYKALFETEVYDRLRDVWYVSSNLNIPRRNNCGVTSNGRIYCIGGYDGSSIIPNVEAYDHRMKAWVEVAPLNTPRSSAMCVAFDNKIYVIGGTNGERLNSIEVYEEKMNKWEQFPYALLEARSSGAAFNYLNQIYVVGGIDNEHNILDSVEQYQPFNKRWQFLNGVPEKKMNFGAATLSDSYIITGGENGEVLNSCHFFSNEWQLGPSLLVPRFGHSVLIANI 726
                                   360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700|      713       723   
                                                                                                                                                                                                                                                                                                                                                                                       700|                      
                                                                                                                                                                                                                                                                                                                                                                                        704
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZGC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZGC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZGC)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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(-) Related Entries Specified in the PDB File

4yy8 SAME PROTEIN, AND BASICALLY THE SAME STRUCTURE WITHOUT A DISUFLIDE BOND BETWEEN CYS580 AND CYS532