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(-) Description

Title :  ACTIVATED CALCIUM-DEPENDENT PROTEIN KINASE 1 FROM CRYPTOSPORIDIUM PARVUM (CPCDPK1) IN COMPLEX WITH AMP
 
Authors :  E. A. Merritt, E. T. Larson, Medical Structural Genomics Of Pathog Protozoa (Msgpp)
Date :  11 Feb 15  (Deposition) - 25 Feb 15  (Release) - 25 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Serine/Threonine Protein Kinase, Transferase, Calcium-Binding, Atp- Binding, Calmodulin, Bumped Kinase Inhibitor, Structural Genomics, Medical Structural Genomics Of Pathogenic Protozoa, Msgpp (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. A. Merritt, E. T. Larson, Medical Structural Genomics Of Pathogenic Protozoa
Activated Calcium-Dependent Protein Kinase 1 From Cryptosporidium Parvum (Cpcdpk1) In Complex With Amp
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CALMODULIN-DOMAIN PROTEIN KINASE 1, PUTATIVE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15MHL
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 70-538
    Gene: CGD3_920
    Organism Scientific: CRYPTOSPORIDIUM PARVUM IOWA II
    Organism Taxid: 353152

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric/Biological Unit (2, 5)
No.NameCountTypeFull Name
1AMP1Ligand/IonADENOSINE MONOPHOSPHATE
2CA4Ligand/IonCALCIUM ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:393 , ASN A:395 , ASP A:397 , MET A:399 , GLU A:404 , HOH A:796binding site for residue CA A 601
2AC2SOFTWAREASP A:443 , ASP A:445 , SER A:447 , SER A:449 , GLU A:451 , GLU A:454binding site for residue CA A 602
3AC3SOFTWAREASP A:479 , ASP A:481 , SER A:483 , LYS A:485 , GLU A:490binding site for residue CA A 603
4AC4SOFTWAREASP A:515 , ASN A:517 , ASP A:519 , GLU A:521 , GLU A:526binding site for residue CA A 604
5AC5SOFTWAREGLY A:85 , VAL A:90 , ALA A:103 , LYS A:105 , GLU A:153 , TYR A:155 , LEU A:205 , ASP A:219 , HOH A:719 , HOH A:729 , HOH A:764 , HOH A:775 , HOH A:787 , HOH A:797binding site for residue AMP A 605

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Y5Q)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4Y5Q)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Y5Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Y5Q)

(-) Exons   (0, 0)

(no "Exon" information available for 4Y5Q)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:449
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhheeeeeeee.....eeeeeee.....eeeeeeeehhhhh..hhhhhhhhhhhhhh........eeeeee...eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee........eee................hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.....hhhhh..hhhhhhhhhhhh........hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhh..........eehhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4y5q A  -3 LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSEQVDNNKDGEVDFNEFVEMLQNFVRN 537
                               ||   75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225    || 238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418   ||  433       443       453       463       473       483       493  ||   518       528         
                               0|                                                                                                                                                             230|                                                                                                                                                                                         422|                                                                 496|                         
                               70                                                                                                                                                              234                                                                                                                                                                                          428                                                                  512
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Y5Q)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Y5Q)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Y5Q)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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        A3FQ16_CRYPI | A3FQ16: 2wei 3dfa 3igo 3mwu 3ncg

(-) Related Entries Specified in the PDB File

3igo CPCDPK1 WITH ATP ANALOG ANP
3mwu CPCDPK1 WITH INHIBITOR RM-1-95
3ncg CPCDPK1 WITH INHIBITOR NM-PP1