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(-) Description

Title :  MIS16 WITH H4 PEPTIDE
 
Authors :  S. An, H. Kim, U. -S. Cho
Date :  02 Feb 15  (Deposition) - 03 Feb 16  (Release) - 17 Feb 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Centromere, Cenp-A, Kinetochore, Mis18 Complex, Histone, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. An, H. Kim, U. S. Cho
Mis16 Independently Recognizes Histone H4 And The Cenp-Acnp1-Specific Chaperone Scm3Sp.
J. Mol. Biol. V. 427 3230 2015
PubMed-ID: 26343758  |  Reference-DOI: 10.1016/J.JMB.2015.08.022

(-) Compounds

Molecule 1 - KINETOCHORE PROTEIN MIS16
    Chains: A
    Engineered: YES
    Expression System: BACULOVIRUS EXPRESSION VECTOR PFASTBAC1-HM
    Expression System Cell Line: HI-5
    Expression System Plasmid: PFASTBAC HTB
    Expression System Taxid: 274590
    Gene: SJAG_03867
    Organism Common: FISSION YEAST
    Organism Scientific: SCHIZOSACCHAROMYCES JAPONICUS (STRAIN YFS275 / FY16936)
    Organism Taxid: 402676
    Strain: YFS275 / FY16936
 
Molecule 2 - HISTONE H4
    Chains: B
    Engineered: YES
    Organism Common: FISSION YEAST
    Organism Scientific: SCHIZOSACCHAROMYCES JAPONICUS (STRAIN YFS275 / FY16936)
    Organism Taxid: 402676
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4XYI)

(-) Sites  (0, 0)

(no "Site" information available for 4XYI)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XYI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4XYI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XYI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XYI)

(-) Exons   (0, 0)

(no "Exon" information available for 4XYI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:375
                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhheeeeeeee........ee........eeeeee.........eeeeeeeee....eeeeeeeee.....eeee......eeeee.hhh.eeeee.hhhh...ee.....eee......eeeeee......eeeeee...eeeeee...........eee...eeee.....eeeeee......eeeeee...eeeeee..........eeee.....eeeeee......eeeeee....eeeee.hhh....eee......eeeeee......eeeeee....eeeee........hhhhhh.....eeeee......eeeeee.......eeeee...eeeeeeehhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xyi A  15 SEVDLEKKIQEEYKLWKQNVPFLYDLVITEALEWPSLTVEWFPGSERSSIQKLLLGTQTSGNDQNYLQVASVQLPYGLDIVQKIHHEGDVNKARFMPQNPDIIATLGLNGNGYIFDLNLYREQPIVQTGHQACLRHHTSEGFGLGWNFIQEGTLATGTEDTSICVWDIKGKSLSLEKSIDVAPVSVYHRHTAVVNDLQFHLQHEALLTSVSDDCTLQIHDTRLPSSSSASQCVKAHEQPVNGVAFNPFNDYLLATASADHTVALWDLRRLNQRLHTLEGHEDEVYNVQWSPHDEPILVTSSTDRRVCVWDLSKIGEEQTVEDSEDGAPELMFMHGGHTNRVSDLSWNPNNKWVLASLADDNILQIWSPSKVIWAS 419
                                    24        34        44        54      ||69        79        89    || 121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411   ||
                                                                         61|                         94|                                                                                                                                                                                                                                                                                                       415|
                                                                          67                         117                                                                                                                                                                                                                                                                                                        419


Chain B from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 4xyi B  29 ITKPAIRRLARRG  41
                                    38
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XYI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XYI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XYI)

(-) Gene Ontology  (15, 16)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        B6K598_SCHJY | B6K598: 4xyh

(-) Related Entries Specified in the PDB File

4xyh