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(-) Description

Title :  CRYSTAL STRUCTURE OF M. CHILENSIS MG662 PROTEIN COMPLEXED WITH GTP
 
Authors :  A. Lartigue, S. Priet, J. M. Claverie, C. Abergel
Date :  26 Jan 15  (Deposition) - 03 Feb 16  (Release) - 03 Feb 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.26
Chains :  Asym./Biol. Unit :  A
Keywords :  Nucleotidyl Transferase, Gtp Complex, Orfan, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Lartigue, S. Priet, J. M. Claverie, C. Abergel
Crystal Structure Of M. Chilensis Mg662 Protein Complexed With Gtp
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MG662
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: MODIFIED PETDUET-1
    Expression System Taxid: 469008
    Expression System Variant: ROSETTA
    Expression System Vector Type: PLASMID
    Gene: MG662
    Organism Scientific: MEGAVIRUS CHILIENSIS
    Organism Taxid: 1094892

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1GTP1Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
2MG2Ligand/IonMAGNESIUM ION
3NA1Ligand/IonSODIUM ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:61 , ASP A:63 , ASP A:208 , MG A:402 , GTP A:404 , HOH A:526 , HOH A:542binding site for residue MG A 401
2AC2SOFTWAREASP A:61 , ASP A:63 , MG A:401 , GTP A:404 , HOH A:610binding site for residue MG A 402
3AC3SOFTWAREILE A:88 , ASP A:91 , ILE A:94 , HOH A:623 , HOH A:710binding site for residue NA A 403
4AC4SOFTWAREGLY A:50 , SER A:51 , THR A:60 , ASP A:61 , ASP A:63 , GLN A:229 , LEU A:232 , ALA A:233 , GLU A:238 , TYR A:241 , LYS A:272 , VAL A:276 , TYR A:344 , MG A:401 , MG A:402 , HOH A:509 , HOH A:526 , HOH A:603 , HOH A:604 , HOH A:610 , HOH A:611 , HOH A:659 , HOH A:705binding site for residue GTP A 404

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XUL)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Tyr A:69 -Pro A:70

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XUL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XUL)

(-) Exons   (0, 0)

(no "Exon" information available for 4XUL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:365
                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhh...hhh.eeeehhhhh......eeeeeee........hhhhhhhhhhhhhhhh..eeeeeeeeee.hhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhheeeehhhhhhhheeee...eeeehhhhhhh..eeeeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh.....hhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.......hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xul A   6 HHSPGSLIYTYKLEKYVRTKIFPKILLIPDKNRYIIKGSFRRRVPFVTDIDVVNNVYPEISRENIYDEIIKLVNNIQSDPNIILAYLSCGTDERFKISTGSSKELSNIQSLLPDNEKNEFQLVLNKYYNDQQKKLFFLNELIWDHYKLRWKPEDVLIGSMNLANNVSVNFRETVENNSTILLQYYVKLGSYPVGIDVVINYQKIDLTPAYKNAALYQLQLANYSREYYYMLFPLRYYFKNNQDISQRLENIIEKKYGLYKQLMVRIDDYHTLYKSGNLKIDMATNIVIGILRDIEKLPGFESDTIYQIKKVATNNSPSIKIEEWDILLKVLYQEINTAVNNKSRKYFYRYIAMVPPQDRSKNYIS 377
                              ||    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372     
                              8|                                                                                                                                                                                                                                                                                                                                                                         
                              16
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XUL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XUL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XUL)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4XUL)

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    Tyr A:69 - Pro A:70   [ RasMol ]  
 

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 Related Entries

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        G5CQN7_9VIRU | G5CQN7: 4ams

(-) Related Entries Specified in the PDB File

4ams 4AMS CONTAINS THE SAME PROTEIN WITHOUT LIGAND. CRYSTALS FROM 4AMS WERE USED FOR SOAKING WITH GTP FOR PRESENT DEPOSITION.