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(-) Description

Title :  X-RAY STRUCTURE OF ALGE2
 
Authors :  P. Ma, C. Y. Huang, V. Olieric, K. Diederichs, M. Wang, M. Caffrey
Date :  15 Jan 15  (Deposition) - 03 Jun 15  (Release) - 17 Jun 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Alge Alginate Export Protein, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Y. Huang, V. Olieric, P. Ma, E. Panepucci, K. Diederichs, M. Wang, M. Caffrey
In Meso In Situ Serial X-Ray Crystallography Of Soluble And Membrane Proteins.
Acta Crystallogr. , Sect. D V. 71 1238 2015
PubMed-ID: 26057665  |  Reference-DOI: 10.1107/S1399004715005210

(-) Compounds

Molecule 1 - ALGINATE PRODUCTION PROTEIN ALGE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ALGE, ALG76, PA3544
    Organism Scientific: PSEUDOMONAS AERUGINOSA PAO1
    Organism Taxid: 208964

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 15)

Asymmetric/Biological Unit (5, 15)
No.NameCountTypeFull Name
178M4Ligand/Ion(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE
278N1Ligand/Ion(2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE
3CA1Ligand/IonCALCIUM ION
4LDA8Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PE51Ligand/Ion3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:40 , PHE A:42 , PRO A:75 , TRP A:318 , ALA A:326 , PHE A:490binding site for residue LDA A 501
02AC2SOFTWAREGLY A:50 , ASN A:67 , ASP A:68binding site for residue LDA A 502
03AC3SOFTWAREALA A:94 , ALA A:95binding site for residue LDA A 503
04AC4SOFTWAREGLN A:91 , ALA A:127 , TYR A:190 , ARG A:191 , THR A:192 , LEU A:194 , GLN A:378 , TRP A:402binding site for residue LDA A 504
05AC5SOFTWARETHR A:213 , GLY A:222binding site for residue LDA A 505
06AC6SOFTWAREPHE A:148 , GLU A:166binding site for residue LDA A 506
07AC7SOFTWARETRP A:81 , ALA A:86 , TYR A:87 , PHE A:88 , PHE A:131 , VAL A:133 , HIS A:219 , MET A:270 , PRO A:271 , LEU A:272 , TYR A:274 , 78M A:512binding site for residue 78M A 507
08AC8SOFTWARETRP A:170 , VAL A:207binding site for residue 78M A 508
09AC9SOFTWARELEU A:388 , TYR A:392binding site for residue 78N A 509
10AD1SOFTWAREARG A:236 , PRO A:237 , GLY A:238 , GLY A:463 , LEU A:464 , THR A:478 , MET A:479 , HIS A:480binding site for residue 78M A 510
11AD2SOFTWAREGLN A:159 , TRP A:254 , SER A:277 , THR A:279 , GLY A:311 , PHE A:344 , GLN A:346 , THR A:347binding site for residue PE5 A 511
12AD3SOFTWARETRP A:81 , VAL A:133 , PHE A:148 , TRP A:215 , ALA A:216 , HIS A:219 , TYR A:274 , 78M A:507binding site for residue 78M A 512
13AD4SOFTWAREILE A:221binding site for residue LDA A 513
14AD5SOFTWARESER A:124 , TYR A:398 , GLN A:428binding site for residue LDA A 514
15AD6SOFTWAREASP A:55 , ASP A:57 , ALA A:61 , GLY A:63binding site for residue CA A 515

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XNL)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4XNL)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XNL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XNL)

(-) Exons   (0, 0)

(no "Exon" information available for 4XNL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:425
                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeee............eeeeeeeeeeeeeeee..eeeeeeeeeeee........hhhhh...eeeeeeeeeeee.........eeeeeeeeee.......eeeeeeeeeeee...eeeeeeeee..................eeeeeeeeeeeee..eeeeeeeeeeee.................eeeeeeeeeeeeee..........eeeeeeeeeeeeeeeee.............eeeeeeeeeeeeeeeeee.....eeeeeeeee...................ee........ee............eeeeeeeeeeee...eeeeeeeeeeee.....................eeeeeeeeeeeee....eeeeeeeeeee...........eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xnl A  39 PKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFMGQAVAATDTIETDTLQSDTPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLREDSGQWQDTNIEALNWSFETTLLNAHAGVAQRFSEYRTDLDELAPEDKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLREDYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF 490
                                    48        58        68        78        88        98       108|      130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       455       465       475       485     
                                                                                               108|                                                                                                                                                                                                                                                                                                                           439|                                   
                                                                                                121                                                                                                                                                                                                                                                                                                                            455
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XNL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XNL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XNL)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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  4xnl
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  ALGE_PSEAE | P18895
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ALGE_PSEAE | P18895: 3rbh 4afk 4azl 4b61 4xnk 5d5d 5iyu

(-) Related Entries Specified in the PDB File

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