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(-) Description

Title :  STRUCTURE OF THERMOPHILIC F1-ATPASE INHIBITED BY EPSILON SUBUNIT
 
Authors :  Y. Shirakihara, A. Shiratori, H. Tanikawa, M. Nakasako, M. Yoshida, T.
Date :  19 Dec 14  (Deposition) - 26 Aug 15  (Release) - 19 Apr 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  F1-Atpase, Atp Synthase, Rotary Motor Protein, Rotational Catalysis, Bacillus Ps3, Thermophilic, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Shirakihara, A. Shiratori, H. Tanikawa, M. Nakasako, M. Yoshida, T. Suzuki
Structure Of A Thermophilic F1 -Atpase Inhibited By An Epsilon-Subunit: Deeper Insight Into The Epsilon-Inhibition Mechanism.
Febs J. V. 282 2895 2015
PubMed-ID: 26032434  |  Reference-DOI: 10.1111/FEBS.13329

(-) Compounds

Molecule 1 - ATP SYNTHASE SUBUNIT ALPHA
    Chains: A, B, C
    EC Number: 3.6.3.14
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ATPA
    Organism Scientific: BACILLUS SP. PS3
    Organism Taxid: 2334
    Synonym: ATP SYNTHASE F1 SECTOR SUBUNIT ALPHA,F-ATPASE SUBUNIT ALPHA
 
Molecule 2 - ATP SYNTHASE SUBUNIT BETA
    Chains: D, E, F
    EC Number: 3.6.3.14
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ATPD
    Organism Scientific: BACILLUS SP. PS3
    Organism Taxid: 2334
    Synonym: ATP SYNTHASE F1 SECTOR SUBUNIT BETA,F-ATPASE SUBUNIT BETA
 
Molecule 3 - ATP SYNTHASE GAMMA CHAIN
    Chains: G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ATPG
    Organism Scientific: BACILLUS SP. PS3
    Organism Taxid: 2334
    Synonym: ATP SYNTHASE F1 SECTOR GAMMA SUBUNIT,F-ATPASE GAMMA SUBUNIT
 
Molecule 4 - ATP SYNTHASE EPSILON CHAIN
    Chains: H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ATPC
    Organism Scientific: BACILLUS SP. PS3
    Organism Taxid: 2334
    Synonym: ATP SYNTHASE F1 SECTOR EPSILON SUBUNIT,F-ATPASE EPSILON SUBUNIT

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 82)

Asymmetric/Biological Unit (3, 82)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MSE77Mod. Amino AcidSELENOMETHIONINE
3SO44Ligand/IonSULFATE ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:171 , GLN A:172 , THR A:173 , GLY A:174 , LYS A:175 , THR A:176binding site for residue SO4 A 700
2AC2SOFTWAREGLN B:172 , THR B:173 , GLY B:174 , LYS B:175 , THR B:176binding site for residue SO4 B 700
3AC3SOFTWAREGLY D:161 , VAL D:162 , GLY D:163 , LYS D:164 , THR D:165binding site for residue SO4 D 700
4AC4SOFTWAREGLY E:159 , ALA E:160 , GLY E:161 , VAL E:162 , GLY E:163 , LYS E:164 , THR E:165binding site for residue SO4 E 700
5AC5SOFTWAREVAL B:363 , GLY F:161 , VAL F:162 , GLY F:163 , LYS F:164 , THR F:165 , VAL F:166 , ARG F:191 , TYR F:341 , PHE F:414 , PHE F:420binding site for residue ADP F 600

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XD7)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric/Biological Unit
No.Residues
1Arg A:354 -Pro A:355
2Arg B:354 -Pro B:355
3Tyr D:341 -Pro D:342
4Tyr E:341 -Pro E:342
5Tyr F:341 -Pro F:342

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XD7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XD7)

(-) Exons   (0, 0)

(no "Exon" information available for 4XD7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:477
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee....................eeeee.......eeee....eee.............eeeeeeee.eee........ee.................eee................ee...hhhhhhhh.ee......eeee...hhhhhhhhhhhh......eeeeeee..hhhhhhhhhhhhhhhh....eeeeee....hhhhhhhhhhhhhhhhhhhhhhh.eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeee..eeee......hhhhhhhhhhh......hhhhhhh....................hhhhhhhh.hhhhhhhhhhhhh..hhhhhhh..hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 A  24 QVSDVGTVIQVGDGIARAHGLDNVmSGELVEFANGVmGmALNLEENNVGIVILGPYTGIKEGDEVRRTGRImEVPVGEALIGRVVNPLGQPVDGLGPVETTETRPIESPAPGVmDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQKDQNmISIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVAmGEYFmYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKLSDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGAAQIKAmKKVAGTLRLDLAAYRELEAFAQFGSDLDKATQAKLARGARTVEVLKQDLHQPIPVEKQVLIIYALTRGFLDDIPVEDVRRFEKEFYLFLDQNGQHLLEHIRTTKDLPDDLNKAIEAFKKTFVVSQ 502
                                    33        43    |   53      | 63        73        83        93 |     103       113       123       133   |   143       153       163       173       183       193       203       213       223       233       243 |    |253       263       273       283       293       303       313       323       333       343       353       363       373 |     383       393       403       413       423       433       443       453       463       473       485       495       
                                                   48-MSE      60-MSE                             95-MSE                                   137-MSE                                               191-MSE                                               245-MSE|                                                                                                                          375-MSE                                                                                                    482|                 
                                                                 62-MSE                                                                                                                                                                                     250-MSE                                                                                                                                                                                                                                  485                 


Chain B from PDB  Type:PROTEIN  Length:423
                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..eeeee.........eeee....eeeeeee....eeeeee..........eee......eee.hhhhh..ee.................eee......hhhhh.....ee...hhhhhhhh.ee......eee....hhhhhhhhhhhh......eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh..........eee.ee........hhhhhhhhh....eee.hhhhhh.........................hhhhhhhh.......hhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 B  26 SDVGTVIQVGDGIARAHGLDNVmSGELVEFANGVmGmALNLEENNVGIVILGPYTGIKEGDEVRRTGRImEVPVGEALIGRVVNPLGQPVDGLGPVETTETRPIESPAPGVmDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQKDQNmISIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVAmGEYFmYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAADAKGGGLTALPFVETQAGDISAYIPTNVISITDQIFLQSDLFFSGVRPAINAGLSVSRVAAQIKAmKKGARTVEVLKQDLHQPPVEKQVLIIYAFLDDIPVEDVRRFEKEFYLFLDQNGQHLLEHIRTTKDLPLNKAIEAFKKTFV 499
                                    35        45  |     55    | | 65        75        85        95       105       115       125       135 |     145       155       165       175       185     | 195       205       215       225       235       245    |  255       265       275       285       295      |308  ||   319       329       339|      350       360     ||372  | || 417       427|      438||     452       462       472       482|      496   
                                                 48-MSE      60-MSE                             95-MSE                                   137-MSE                                               191-MSE                                               245-MSE|                                                 302|  311|                       339|                      366|     | ||           427|       439|                                   482|            
                                                               62-MSE                                                                                                                                                                                     250-MSE                                              306   313                        341                       369     | ||            429        444                                    487            
                                                                                                                                                                                                                                                                                                                                                                                375-MSE                                                                            
                                                                                                                                                                                                                                                                                                                                                                                  377|                                                                             
                                                                                                                                                                                                                                                                                                                                                                                   413                                                                             


Chain C from PDB  Type:PROTEIN  Length:475
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..eeeeee........eeee....eeeeeeee..eeeeee............ee......eee........ee.................eee.....................hhhhhhh..........eeee...hhhhhhhhhhhh......eeeeeee..hhhhhhhhhhhhhhh......eeeee....hhhhhhhhhhhhhhhhhhhhhhh.eeeeeeehhhhhhhhhhhhhhhh..........hhhhhhhhhhh.....hhhhh..eeee..eeee......hhhhhhhhh........hhhhhh....................hhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh............hhhhhhhhhhhhhh...hhhhhhhhh.......hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 C  26 SDVGTVIQVGDGIARAHGLDNVmSGELVEFANGVmGmALNLEENNVGIVILGPYTGIKEGDEVRRTGRImEVPVGEALIGRVVNPLGQPVDGLGPVETTETRPIESPAPGVmDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQKDQNmISIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVAmGEYFmYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPREAYPGDIFYLHSRLLERAAKLSDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFGVRPAINAGLSVSRVGGAAQIKAmKKVAGTLRLDLAAYRELEAFAQFGSDLDKATQAKLARGARTVEVLKQDLHQPIPVEKQVLIIYALTRGFLDDIPVEDVRRFEKEFYLFLDQNGQHLLEHIRTTKDLPNEDDLNKAIEAFKKTFVVSQ 502
                                    35        45  |     55    | | 65        75        85        95       105       115       125       135 |     145       155       165       175       185     | 195       205       215       225       235       245    |  255       265       275     ||286       296       306       316       326       336       346   ||  357       367       377       387       397       407       417       427       437       447       457       467       477       487       497     
                                                 48-MSE      60-MSE                             95-MSE                                   137-MSE                                               191-MSE                                               245-MSE|                            281|                                                                350|                    375-MSE                                                                                                                           
                                                               62-MSE                                                                                                                                                                                     250-MSE                         283                                                                 352                                                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:470
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeee..........eeeeeee.........eeeeeeeeee....eeeee...........eeeeeeee.eee.hhhhh..ee..................eee......hhhhh..........hhhhhhhh......eeeee.....hhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh........eeeeeee.........hhhhhhhhh...eeee...................ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhh....hhhhhhhhh......hhhhhhhhhhhhhhh.....hhhhh....hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 D   2 TRGRVIQVmGPVVDVKFENGHLPAIYNALKIQHKARNENEVDIDLTLEVALHLDDTVRTIAmASTDGLIRGmEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEmKDSGVISKTAmVFGQmNEPPGARmRVALTGLTmAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRmPSAVGYQPTLATEmGQLQERITSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEmGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGmDELSDEDKLVVHRARRIQFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKEILEGKYDHLPEDAFRLVGRIEEVVEKAKAmGVE 472
                                    11        21        31        41        51  ||    62 |      72 |      82        92       102       112       122       132       142       152       162       172       182       192       202       212|    | 222   |   232  |    242       252       262       272       282  |    292       302       312       322       332     | 342       352       362       372       382      |392       402       412       422       432       442       452       462      |472
                                   10-MSE                                      54|      64-MSE    74-MSE                                                                                                                         202-MSE    213-MSE|     226-MSE  235-MSE                             271-MSE       285-MSE                                              338-MSE                                            389-MSE                                                                         469-MSE
                                                                                56                                                                                                                                                               218-MSE                                                                                                                                                                                                                                                          


Chain E from PDB  Type:PROTEIN  Length:469
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeee............eeeeee.........eeeeeeeeee.....eeee............eeee.....eee.......eee..................eee................ee...hhhhhhhh.ee...eeeee.....hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh...........hhhhhhhhhhh........eeeeee..........hhhhhhhhhh..eeee.hhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh....hhhhhhh........hhhhhhhhhhhhhh......hhhhh....hhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 E   2 TRGRVIQVmGPVVDVKFENGHLPAIYNALKIQHKARNENEVDIDLTLEVALHLGDDTVRTIAmASTDGLIRGmEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEmKDSGVISKTAmVFGQmNEPPGARmRVALTGLTmAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRmPSAVGYQPTLATEmGQLQERITSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEmGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGmDELSDEDKLVVHRARRIQFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKEILEGKYDHLPEDAFRLVGRIEEVVEKAKAmG 470
                                    11        21        31        41        51        61  |     71  |     81        91       101       111       121       131       141       151       161       171       181       191       201|      211 |    |221    |  231   |   241       251       261       271       281   |   291       301       311       321       331      |341       351       361       371       381       391       401       411       421       431       441       451       461       | 
                                   10-MSE                                                64-MSE    74-MSE                                                                                                                         202-MSE    213-MSE|     226-MSE  235-MSE                             271-MSE       285-MSE                                              338-MSE                                            389-MSE                                                                         469-MSE
                                                                                                                                                                                                                                                  218-MSE                                                                                                                                                                                                                                                        


Chain F from PDB  Type:PROTEIN  Length:464
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..eeeee.........eeeeee.........eeeeeeeeee....eeeeee..........ee.ee.....eeee.......ee.................eeee................ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhh......eeeeeeeeehhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhh....hhhhh..hhhhhhhh............eeeeeeee.hhhh..hhhhhhhhhhh.eeee.hhhhhhhh..........ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhh......hhhhhh...hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 F   4 GRVIQVmGPVVDVKFNGHLPIYNALKIQHKARNENEVDIDLTLEVALHLGDDTVRTIAmASTDGLIRGmEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEmKDSGVISKTAmVFGQmNEPPGARmRVALTGLTmAEYFRDEQQDVLLFIDNIFRFTQAGSEVSALLGRmPSAVGYQPTLATEmGQLQERITSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEmGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGmDELSDEDKLVVHRARRIQFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKEILEGKYDHLPEDAFRLVGRIEEVVEKAKAmG 470
                                  | 13    ||  24|       35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195      |205       215  |    225|      235       246       256       266    |  276       286       296       306       316       326       336 |     346       356       366       376       386  |    396       406       416       426       436       446       456       466  | 
                                 10-MSE  18|  24|                                    64-MSE    74-MSE                                                                                                                         202-MSE    213-MSE|     226-MSE  235-MSE 243|                       271-MSE       285-MSE                                              338-MSE                                            389-MSE                                                                         469-MSE
                                          20   26                                                                                                                                                                                             218-MSE                   245                                                                                                                                                                                                                                 


Chain G from PDB  Type:PROTEIN  Length:254
                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh............eeee........hhhhhhhhhhhhh...........eeeehhhhhhhhhhh...................hhhhhhhhhhh......eeeee.........ee...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 G   1 mASLRDIKTRINATKKTSQITKAmEmVSTSKLNRAEQNAKSFVPYmEKIQEVVANVALVSRPVKKTGYLVITSDRGLAGAYNSNVLRLVYQTIQRHACPDEYAIIVIGRVGLSFFRKRNVILDITRLPDQPSFADIKEIARKTVGLFADTFDELYmYYNHYVSAIQQEVTERKLLPLTQEEILDVLLPQYAESLIYGALLDAKASEHAARmTAmKNATDNANELIRTLTLSYNRARQAAITQEITEIVAGANAL 284
                            |       10        20   | |  30        40     |  50       |70        80        90       100   ||  111       121       133       143       153       164     | 174       184       210       220       230       240|  |   250       260       270       280    
                            |                     24-MSE                46-MSE      58|                                104|                     130|                          162|     |                   192|                             241-MSE                                       
                            1-MSE                   26-MSE                           69                                 106                      133                           164     |                    209                                244-MSE                                    
                                                                                                                                                                                     170-MSE                                                                                              


Chain H from PDB  Type:PROTEIN  Length:129
                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee.......eeee.eeee.....eee......eeee...ee.eee.....eee..eeeee..eeeee..eee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xd7 H   1 mKTIHVSVVTPDGPVYEDDVEmVSVKAKSELGILPGHIPLVAPLEISAARLKKGGKIAVSGGFLEVRPDKVTILAQAAERAEDIDVLRAKAAKERAERRLQSQQDDIDFKRAELALKRAmNRLSVAEmK 133
                            |       10        20 |      31        41        51     || 64        74        84        94       104       114       124       | 
                            1-MSE               22-MSE 29|                        57|                                                            124-MSE 132-MSE
                                                        31                         61
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XD7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XD7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XD7)

(-) Gene Ontology  (18, 59)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Arg A:354 - Pro A:355   [ RasMol ]  
    Arg B:354 - Pro B:355   [ RasMol ]  
    Tyr D:341 - Pro D:342   [ RasMol ]  
    Tyr E:341 - Pro E:342   [ RasMol ]  
    Tyr F:341 - Pro F:342   [ RasMol ]  
 

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 Related Entries

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        ATPE_GEOKA | Q5KUJ4: 2e5t 2e5u

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4XD7)