4XCV - JenaLib

Title :   PROBABLE 2-HYDROXYACID DEHYDROGENASE FROM RHIZOBIUM ETLI CFN 42 IN COMPLEX WITH NADPH

Authors :   K. M. Langner, I. G. Shabalin, K. B. Handing, O. A. Gasiorowska, M. Stead B. S. Hillerich, S. Chowdhury, J. Hammonds, M. D. Zimmerman, N. Al Oba J. Bonanno, R. Seidel, S. C. Almo, W. Minor, New York Structural Gen Research Consortium (Nysgrc)

Date :   18 Dec 14 (Deposition) - 31 Dec 14 (Release) - 28 Jan 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.40

Chains :   Asym. Unit : A
Biol. Unit 1: A  (2x)

Keywords :   Psi-Biology, New York Structural Genomics Research Consortium, 2- Hydroxyacid Dehydrogenase, Nadp, Nysgrc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. M. Langner, I. G. Shabalin, K. B. Handing, O. A. Gasiorowska, M. D. Zimmerman, W. Minor
Crystal Structure Of 2-Hydroxyacid Dehydrogenase From Rhizobium Etli Cfn 42 In Complex With Nadph
To Be Published
PubMed: search

Compounds

Molecule 1 - NADP-DEPENDENT 2-HYDROXYACID DEHYDROGENASE
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PSGC-HIS
	Expression System Strain	:	BL21 (DE3) RIL
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	RHE_CH00179
	Organism Scientific	:	RHIZOBIUM ETLI (STRAIN CFN 42 / ATCC 51251)
	Organism Taxid	:	347834
	Strain	:	CFN 42 / ATCC 51251

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Count	Type	Full Name
1	CL	1	Ligand/Ion	CHLORIDE ION
2	NDP	1	Ligand/Ion	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
3	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Biological Unit 1 (2, 4)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	NDP	2	Ligand/Ion	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
3	PEG	2	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ALA A:74 , ARG A:92 , MET A:102 , LEU A:147 , GLY A:148 , ILE A:149 , LEU A:150 , TRP A:168 , SER A:169 , ARG A:170 , THR A:171 , LYS A:173 , LEU A:199 , LEU A:200 , PRO A:201 , GLU A:205 , ALA A:232 , GLY A:233 , ARG A:234 , ASP A:258 , HIS A:282 , ALA A:285 , TYR A:319 , HOH A:531 , HOH A:587 , HOH A:715 , HOH A:725 , HOH A:735 , HOH A:740 , HOH A:745 , HOH A:757 , HOH A:764 , HOH A:794 , HOH A:797 , HOH A:803 , HOH A:837 , HOH A:840	binding site for residue NDP A 401
2	AC2	SOFTWARE	ARG A:234 , GLY A:235 , LYS A:236 , HOH A:809	binding site for residue CL A 402
3	AC3	SOFTWARE	MET A:108 , GLN A:109 , GLN A:117 , HIS A:120 , ASP A:121 , GLN A:124 , PHE A:278 , ILE A:279 , THR A:280 , HOH A:549	binding site for residue PEG A 403

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:317
                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee..hhhhhhhhhh.......eee..hhhhh........eeeee....hhhhhh....eeee....hhhhhh........ee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhh.eeeee..hhhhhhhhhhhhhhh.eeeee..........eeehhhhhhhhhhh..eeee....hhhhh...hhhhhh...........eeee..hhhhhhhhhhhhhhhh....eeee...........hhhhhh..eee..........hhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xcv A   3 VRPPVLVDIKFNPEGVDRVLKTAFADRGSINLADPANRERDFSETEYALLWKPDADLFRRAPNLKVIFSGGAGVDHIIGMAGLPDIPIVRFVDRSLTTRMSEWVVMQCLMHLRGQYGHDSHQRRREWAKLIAPEAAEVTVGVMGLGILGQDAVAKLKVMGFNVIGWSRTRKTIEGVETFDAGELDRFLAKTDILVGLLPLTPETTGFYDSELFKKLRRDGALGQPVFINAGRGKSQIETDIVSAVREGTLGGASLDVFEVEPLATDSPLWELENVFITPHDAAVSEENALFRHVEMQIARFERGEPLQFVIDRAAGY 319
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312

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Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (3, 3)

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