4USP - JenaLib

Title :   X-RAY STRUCTURE OF THE DIMERIC CCL2 LECTIN IN NATIVE FORM

Authors :   S. Bleuler-Martinez, A. Varrot, M. Schubert, M. Stutz, R. Sieber, M. He M. Aebi, M. Kunzler

Date :   11 Jul 14 (Deposition) - 22 Jul 15 (Release) - 03 May 17 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.25

Chains :   Asym./Biol. Unit : A,B

Keywords :   Sugar Binding Protein, Lectin, Fungal (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Bleuler-Martinez, K. Stutz, R. Sieber, M. Collot, J. M. Mallet, M. Hengartner, M. Schubert, A. Varrot, M. Kunzler
Dimerization Of The Fungal Defense Lectin Ccl2 Is Essential For Its Toxicity Against Nematodes.
Glycobiology V. 27 486 2017
PubMed-ID: 27980000 | Reference-DOI: 10.1093/GLYCOB/CWW113

Compounds

Molecule 1 - CCL2 LECTIN
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Expression System Vector	:	PET22B
	Expression System Vector Type	:	PLASMID
	Organism Common	:	INK CAP FUNGUS
	Organism Scientific	:	COPRINOPSIS CINEREA
	Organism Taxid	:	5346

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 2)

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:36 , HOH A:2071 , ARG B:36	BINDING SITE FOR RESIDUE CL A 201
2	AC2	SOFTWARE	TRP A:78 , HOH A:3073 , TRP B:78	BINDING SITE FOR RESIDUE PO4 B 200

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:135
                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee.........eeee.........eeee...hhhh.eeeeeee....eeeeee......eeeee...eeeee......eeeeee..eeeeee.....eee..........eee........eeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4usp A   8 LSAGNYIIYNRVLSPRGEKLALTYPGRQRTPVTVSPLDGSSEQAWILRSYDSNSNTWTISPVGSPNSQIGWGAGNVPVVLPPNNYVWTLTLTSGGYNIQDGKRTVSWSLNNATAGEEVSIGADATFSGRWVIEKV 142
                                    17        27        37        47        57        67        77        87        97       107       117       127       137

Chain B from PDB  Type:PROTEIN  Length:135
                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee.........eeee.........eeee...hhhh.eeeeeeehhh.eeeeee......eeeee...eeeee......eeeeee..eeeeee.....eee..........eee........eeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4usp B   8 LSAGNYIIYNRVLSPRGEKLALTYPGRQRTPVTVSPLDGSSEQAWILRSYDSNSNTWTISPVGSPNSQIGWGAGNVPVVLPPNNYVWTLTLTSGGYNIQDGKRTVSWSLNNATAGEEVSIGADATFSGRWVIEKV 142
                                    17        27        37        47        57        67        77        87        97       107       117       127       137

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (1, 1)

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	Sites
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	Cis Peptide Bonds
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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File

4uso	X-RAY STRUCTURE OF THE CCL2 LECTIN IN COMPLEX WITH SIALYL LEWIS X
4ut5	CRYSTAL STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PA7 IN COMPLEX WITH LEWIS A TETRASACCHARIDE

Description