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(-) Description

Title :  MOLECULAR GENETIC AND CRYSTAL STRUCTURAL ANALYSIS OF 1-(4-HYDROXYPHENYL)-ETHANOL DEHYDROGENASE FROM AROMATOLEUM AROMATICUM EBN1
 
Authors :  I. Buesing, H. W. Hoeffken, M. Breuer, L. Woehlbrand, B. Hauer, R. Rabu
Date :  28 Jun 14  (Deposition) - 08 Jul 15  (Release) - 13 Jan 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Oxidoreductase, Short Chain Dehydrogenase, Aromatic Compounds, Anaerobic Degradation, Alcohol Dehydrogenase, Molecular Genetics, Stereochemistry (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. Busing, H. W. Hoffken, M. Breuer, L. Wohlbrand, B. Hauer, R. Rabus
Molecular Genetic And Crystal Structural Analysis Of 1-(4- Hydroxyphenyl)-Ethanol Dehydrogenase From 'Aromatoleum Aromaticum' Ebn1.
J. Mol. Microbiol. Biotechnol. V. 25 327 2015
PubMed-ID: 26488297  |  Reference-DOI: 10.1159/000439113

(-) Compounds

Molecule 1 - CYCLOHEXANOL DEHYDROGENASE
    Chains: A, B
    EC Number: 1.1.1.311
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: AROMATOLEUM AROMATICUM EBN1
    Organism Taxid: 76114
    Synonym: HYDROXYPHENYL-ETHANOL DEHYDROGENASE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 8)

Asymmetric Unit (4, 8)
No.NameCountTypeFull Name
11PS1Ligand/Ion3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
2ACT3Ligand/IonACETATE ION
3MG2Ligand/IonMAGNESIUM ION
4SO42Ligand/IonSULFATE ION
Biological Unit 1 (3, 12)
No.NameCountTypeFull Name
11PS2Ligand/Ion3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
2ACT6Ligand/IonACETATE ION
3MG-1Ligand/IonMAGNESIUM ION
4SO44Ligand/IonSULFATE ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:142 , TYR A:155 , ALA A:186 , HOH A:2154 , HOH A:2203 , HOH A:2204BINDING SITE FOR RESIDUE SO4 A1249
2AC2SOFTWAREILE B:92 , THR B:190 , LEU B:192 , VAL B:193 , 1PS B:1250BINDING SITE FOR RESIDUE SO4 B1249
3AC3SOFTWAREASN B:15 , GLY B:16 , ILE B:17 , GLY B:18 , ASN B:89 , GLY B:91 , SER B:141 , TYR B:155 , PRO B:185 , ALA B:186 , THR B:190 , SO4 B:1249 , ACT B:1253 , HOH B:2017 , HOH B:2087BINDING SITE FOR RESIDUE 1PS B1250
4AC4SOFTWAREARG B:248 , HOH B:2160 , HOH B:2162 , HOH B:2164BINDING SITE FOR RESIDUE MG B1251
5AC5SOFTWAREARG A:248 , HOH A:2194 , HOH A:2196 , HOH A:2199BINDING SITE FOR RESIDUE MG A1250
6AC6SOFTWAREHOH A:2064 , ARG B:19 , THR B:20 , LEU B:23 , HOH B:2022 , HOH B:2153 , HOH B:2170BINDING SITE FOR RESIDUE ACT B1252
7AC7SOFTWARESER B:142 , TYR B:155 , 1PS B:1250 , HOH B:2093 , HOH B:2168BINDING SITE FOR RESIDUE ACT B1253
8AC8SOFTWAREASN B:15 , GLY B:16 , THR B:191 , LEU B:192BINDING SITE FOR RESIDUE ACT B1254

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4URE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4URE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4URE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4URE)

(-) Exons   (0, 0)

(no "Exon" information available for 4URE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhh.hhhhhhhhhh........hhhhhhhhhhhhhhhhhh.....eeee..hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ure A   1 MLLEGKTALVTGAGNGIGRTIALTYAAEGANVVVSDISDEWGRETLALIEGKGGKAVFQHADTAHPEDHDELIAAAKRAFGRLDIACNNAGISGEFTPTAETTDAQWQRVIGINLSGVFYGVRAQIRAMLETGGGAIVNISSIAGQIGIEGITPYTAAKHGVVGLTKTVAWEYGSKGIRINSVGPAFINTTLVQNVPLETRRQLEQMHALRRLGETEEVANLVAWLSSDKASFVTGSYYAVDGGYLAR 248
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240        


Chain B from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhh.hhhhhhhhhh........hhhhhhhhhhhhhhhhhh.....eeee..hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ure B   1 MLLEGKTALVTGAGNGIGRTIALTYAAEGANVVVSDISDEWGRETLALIEGKGGKAVFQHADTAHPEDHDELIAAAKRAFGRLDIACNNAGISGEFTPTAETTDAQWQRVIGINLSGVFYGVRAQIRAMLETGGGAIVNISSIAGQIGIEGITPYTAAKHGVVGLTKTVAWEYGSKGIRINSVGPAFINTTLVQNVPLETRRQLEQMHALRRLGETEEVANLVAWLSSDKASFVTGSYYAVDGGYLAR 248
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4URE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4URE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4URE)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)

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4urf MOLECULAR GENETIC AND CRYSTAL STRUCTURAL ANALYSIS OF 1 -(4-HYDROXYPHENYL)-ETHANOL DEHYDROGENASE FROM AROMATOLEUM AROMATICUM EBN1