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(-) Description

Title :  CRYSTAL STRUCTURE OF SALMONELLA ALPHA-2-MACROGLOBULIN REACTED WITH METHYLAMINE
 
Authors :  S. G. Wong, A. Dessen
Date :  24 Jul 14  (Deposition) - 17 Sep 14  (Release) - 01 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.09
Chains :  Asym./Biol. Unit :  A
Keywords :  Macroglobulin, Thioester, Protease Inhibitor, Methylamine, Hydrolase Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. G. Wong, A. Dessen
Structure Of A Bacterial Alpha 2-Macroglobulin Reveals Mimicry Of Eukaryotic Innate Immunity.
Nat Commun V. 5 4917 2014
PubMed-ID: 25221932  |  Reference-DOI: 10.1038/NCOMMS5917

(-) Compounds

Molecule 1 - ALPHA-2-MACROGLOBULIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: CY43_13515
    Mutation: YES
    Organism Scientific: SALMONELLA TYPHIMURIUM
    Organism Taxid: 90371

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1MEQ1Mod. Amino AcidN5-METHYLGLUTAMINE

(-) Sites  (0, 0)

(no "Site" information available for 4U59)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4U59)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4U59)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4U59)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4U59)

(-) Exons   (0, 0)

(no "Exon" information available for 4U59)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1538
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.....eeeeeeeee..eeeeeeee.............eeeee..........ee.....eeeee......eeeeee...............eeeeee........................eeeee........eeee....hhhhhhhhh.....................eeeee...........eeeeee.....eeeeee..eeeeeee...eeeeeeee.........eeeee......eeeeee.....eeeee......eeeeee..eeeeee.....................eeeee....ee....eeeeeeeee...........eeeeee.....eeeeeee......eeeeee.......eeeeeeee......eeeeeee.......eeeeee...........eeeeeeeee...ee.....eeeeeeeee......................eeeeeeee......eeeeee..........eeeeeeeee.......eeeeeeeee.....eeeeee...eeeee......eeeee.....eeeeeeeeee........eeeeeeeeeeeeeeeeee.......eeeeeeeeeeeeeeeeee.....eeeeeee...eeeeeeee...eeeeeeee.........eeee.........eeeeeee....eeeeeeee....eeeeeeeee....eeeeee..........eeeeeee............eeeeeee....hhh.eeeeeee...ee...eeeeeeeeee..........eeeeeeeehhhhhhhh....hhhhhhhh......eeee.....................eee...ee.....eeeeeeee....eeeeeeeeee....eeeeeeeeee...eeeeee...eee...eeeeeeeeee.....eeeeeeeeeee.eee.......eee....eeeeeeeeee....eeeeeeeeee...........eeeeeeeeee.....eeeeeeeee....eee.hhhhh........eeeeeee.....hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.......eeeee......eee...eeee.hhhhhhh.eeee.....eeeeeeeee............eeeeeeee...........ee...eeeeeeeeee...eeeeeeeee....eee.......hhhhhhhhhhhhh..eeeeee...eeeeeeee.....eeeeeeeee...eeee....eeee......eee.....eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4u59 A   50 LAQQSQGKALTLLDASEAQLDGAATLVLTFSIPLDPEQDFSRVVHVVDAASGSVDGAWELAPNLKELRLRHLEPERVLVVTVDPAVKALNNATFGKSYEKTITTRDVQPSVGFASRGSLLPGKIAEGLPVMALNVNHVDVNFFRVKPGSLASFVSQWEYMADLVYTGRFDLNPARNTREKLLLPLSDIKPLQQAGVYVAVMNSNAATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQSGIEIVLLNDKGQTLAQATSDAQGHVQLEADKAAALLLARKEEQTTLLDLTLPALDLSEFNVAGAPGYSKQFFMFGPRDLYRPGETVILNGLLRDSDGKTLPDQPVKLEVVKPDGQVMRTVVSQPENGLYRLNYPLDINAPTGLWHVRANTGDNLLRSWDFHVEDFMPERMALNLTAQKTPLAPADEVKFSVVGYYLYGAPANGNTLQGQLFLRPLRDAVAALPGFQFGNIAEENLSRSLDEVQLTLDKGGRGEVSAASQWQEAHSPLQVILQASLLESGGRPVTRRVEQAIWPADTLPGIRPQFAAKAVYDYRTDTTVNQPIVDEDSNAAFDIVYANAQGEKKAVSGLQVRLIRERRDYYWNWSESEGWQSQFDQKDLVEGEQTLDLNADETGKVSFPVEWGAYRLEVKAPNETVSSVRFWAGYSWPDRVTLKLDKANYRPGDTMKLHIAAPVAGKGYAMVESSDGPLWWQAIDVPAQGLELTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGLLHLPLGDDNRRLDLALESPAKMRPNQPLTVRVKASVKHGEMPKQINVLVSAVDSGVLNITDYATPDPWQAFFGQKRYGADIYDIYGQVIEGQGRLAALRHVNIIAQQAQPITLNEQGEGVVTLPIGDFNGELRVMAQAWTADDFGRGESKVVVAAPVIAELNMPRFLAGGDVSRLVLDVTNLTDRPQTLNIALAASGLLELLSQQPQPVNLAPGVRTTLFVPVRALEGFGEGEIQATISGLNLPGETLDAQHKQWQIGVRPAWPAQTVNSGIALAPGESWHVPEQHLANISPATLQGQLLLSGKPPLNLARYIRELKAYPYGCLEqTTSGLFPALYTNAAQLQSLGITGDSDEKRRAAVDIGISRILQMQRDNGGFALWDENGAEEPWLTAYAMDFLIRAGEQGYSVPPEAINRGNERLLRYLQDPGTMLIRYSDNTQASTFAAQAYAALVLARQQKAPLGTLREIWERRSQAASGLPLMQLGIALNTMGDARRGEEAITLALNTPRQDERQWIADYGSSLRDNALMLSLLEENNLRPDAQNALLSSLSEQAFGQRWLSTQENNALFLAAHSRQASAGAWQVQTSLEAQPLSGDKALTRNLDADQLAALEVTNTGSQPLWLRLDSSGYPSSAPEPASNVLQIERQILGTDGQRKSLSSLRSGELVLVWLTVVADRNVPDALVVDLLPAGLELENQNLASGSEVQNLLNQMQQADIQYMEFRDDRFVAAVVVNEGQPVTLVYLARAVTPGTYQLAQPQVESMYAPQWRATGASEGLLIVTP 1644
                                    59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       223       233       243       253       263 ||    280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730    || 751       761       771       781       791       801       811       821       831       841       851       861       871       881       891       901       911       921       931      |958       968       978       988       998      1008      1018      1028      1038      1048      1058      1068      1078      1088      1098      1108      1118      1128      1138      1148      1158      1168      1178   |  1188      1198      1208      1218      1228      1238      1248      1258      1268      1278      1288      1298      1308      1318      1328      1338      1348      1358      1368      1378      1388      1398      1408      1418      1428      1438      1448      1458      1468      1478      1488      1498      1508      1518      1528      1538      1548     |1566      1576      1586      1596      1606      1616      1626      1636        
                                                                                                                                                                                        208|                                       265|                                                                                                                                                                                                                                                                                                                                                                                                                                                                           735|                                                                                                                                                                                            938|                                                                                                                                                                                                                              1182-MEQ                                                                                                                                                                                                                                                                                                                                                                            1554|                                                                                 
                                                                                                                                                                                         223                                        273                                                                                                                                                                                                                                                                                                                                                                                                                                                                            747                                                                                                                                                                                             956                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   1563
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4U59)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4U59)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4U59)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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  4u59
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 Related Entries

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        Q8ZN46_SALTY | Q8ZN46: 4u48 4u4j

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