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(-) Description

Title :  CRYSTAL STRUCTURE OF SALMONELLA ALPHA-2-MACROGLOBULIN
 
Authors :  S. G. Wong, A. Dessen
Date :  23 Jul 14  (Deposition) - 17 Sep 14  (Release) - 23 Sep 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.95
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase Inhibitor, Thioester, Protease Inhibitor, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. G. Wong, A. Dessen
Structure Of A Bacterial Alpha 2-Macroglobulin Reveals Mimicry Of Eukaryotic Innate Immunity.
Nat Commun V. 5 4917 2014
PubMed-ID: 25221932  |  Reference-DOI: 10.1038/NCOMMS5917

(-) Compounds

Molecule 1 - PUTATIVE INNER MEMBRANE LIPOPROTEIN
    Atcc: 700720
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 19-1644
    Gene: STM2532
    Mutation: YES
    Organism Scientific: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM STR. LT2
    Organism Taxid: 99287
    Synonym: ALPHA-2-MACROGLOBULIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 22)

Asymmetric/Biological Unit (1, 22)
No.NameCountTypeFull Name
1MSE22Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4U48)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4U48)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4U48)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4U48)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4U48)

(-) Exons   (0, 0)

(no "Exon" information available for 4U48)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1538
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.....eeeeeeeee..eeeeeeee.............eeeee..........ee.....eeeee......eeeeee...............eeeeee.............eeeeee.....eeeee....ee..eeee....hhhhhhhhh...........ee........eeeee...........eeeeee.....eeeeee..eeeeeeee..eeeeeeee.........eeeeee.....eeeeee.....eeee.....eeeeeeee..eeeeee.....................eeeee....ee....eeeeeeeee...........eeeeee.....eeeeeee......eeeeee.......eeeeeeee......eeeeeee.......eeeeee...........eeeeeeeee..........eeeeeeeee......................eeeeeeee......eeeeee..........eeeeeeeee.......eeeeeeeee.....eeeeee...eeeee......eeeee.....eeeeeeeeee........eeeeeeeeeeeeeeeeeeee...eeeeeeeeeeeeeeeeeeee.....eeeeeee...eeeeeee.....eeeeeee.........eeee.........eeeeeee....eeeeeeee....eeeeeeeee....eeeeee..........eeeeeee............eeeeeee........eeeeeee...ee.....eeeeeeee..........eeeeeeeehhhhhhh.....hhhhhhhh......eeee.....................eee...ee.....eeeeee......eeeeeeeeee....eeeeeeeeee...eeeeee...eee...eeeeeeeeee.....eeeeeeeeeee.eee.......eee....eeeeeeeeee....eeeeeeeeee...........eeeeeeeeee.....eeeeeeeee....eee.hhhhh..eeeeeeeeeeeee.....hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.......eeeee......eee...eeeeehhhhhhh.eeee.....eeeeeeeeeee......ee..eeeeeeee...........ee...eeeeeeeeee...eeeeeeeee....eee........hhhhhhhhhhh...eeeeee...eeeeeeee.....eeeeeeeee...eeee....eeee......eee.....eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4u48 A   50 LAQQSQGKALTLLDASEAQLDGAATLVLTFSIPLDPEQDFSRVVHVVDAASGSVDGAWELAPNLKELRLRHLEPERVLVVTVDPAVKALNNATFGKSYEKTITTRDVQPSVGFASRGSLLPGKIAEGLPVmALNVNHVDVNFFRVKPGSLASFVSQWEYmADLVYTGRFDLNPARNTREKLLLPLSDIKPLQQAGVYVAVmNSNAATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQSGIEIVLLNDKGQTLAQATSDAQGHVQLEADKAAALLLARKEEQTTLLDLTLPALDLSEFNVAGAPGYSKQFFmFGPRDLYRPGETVILNGLLRDSDGKTLPDQPVKLEVVKPDGQVmRTVVSQPENGLYRLNYPLDINAPTGLWHVRANTGDNLLRSWDFHVEDFmPERmALNLTAQKTPLAPADEVKFSVVGYYLYGAPANGNTLQGQLFLRPLRDAVAALPGFQFGNIAEENLSRSLDEVQLTLDKGGRGEVSAASQWQEAHSPLQVILQASLLESGGRPVTRRVEQAIWPADTLPGIRPQFAAKAVYDYRTDTTVNQPIVDEDSNAAFDIVYANAQGEKKAVSGLQVRLIRERRDYYWNWSESEGWQSQFDQKDLVEGEQTLDLNADETGKVSFPVEWGAYRLEVKAPNETVSSVRFWAGYSWPDRVTLKLDKANYRPGDTmKLHIAAPVAGKGYAmVESSDGPLWWQAIDVPAQGLELTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGLLHLPLGDDNRRLDLALESPAKmRPNQPLTVRVKASVKHGEmPKQINVLVSAVDSGVLNITDYATPDPWQAFFGQKRYGADIYDIYGQVIEGQGRLAALRHVNIIAQQAQPITLNEQGEGVVTLPIGDFNGELRVmAQAWTADDFGRGESKVVVAAPVIAELNmPRFLAGGDVSRLVLDVTNLTDRPQTLNIALAASGLLELLSQQPQPVNLAPGVRTTLFVPVRALEGFGEGEIQATISGLNLPGETLDAQHKQWQIGVRPAWPAQTVNSGIALAPGESWHVPEQHLANISPATLQGQLLLSGKPPLNLARYIRELKAYPYGCLEQTTSGLFPALYTNAAQLQSLGITGDSDEKRRAAVDIGISRILQmQRDNGGFALWDENGAEEPWLTAYAmDFLIRAGEQGYSVPPEAINRGNERLLRYLQDPGTmLIRYSDNTQASTFAAQAYAALVLARQQKAPLGTLREIWERRSQAASGLPLmQLGIALNTmGDARRGEEAITLALNTPRQDERQWIADYGSSLRDNALmLSLLEENNLRPDAQNALLSSLSEQAFGQRWLSTQENNALFLAAHSRQASAGAWQVQTSLEAQPLSGDKALTRNLDADQLAALEVTNTGSQPLWLRLDSSGYPSSAPEPASNVLQIERQILGTDGQRKSLSSLRSGELVLVWLTVVADRNVPDALVVDLLPAGLELENQNLASGSEVQNLLNQmQQADIQYmEFRDDRFVAAVVVNEGQPVTLVYLARAVTPGTYQLAQPQVESmYAPQWRATGASEGLLIVTP 1644
                                    59        69        79        89        99       109       119       129       139       149       159       169       179|      189       199       223       233       243       253       263|||    280       290       300       310       320       330       340       350       360       370       380 |     390       400       410       420     | 430       440       450       460       470    |  480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730    || 751       761   |   771       781       791       801       811       821       831       841       851       861       871       881       891       901       911       921       931      |958       968       978       988  |    998      1008      1018|     1028      1038      1048      1058      1068      1078      1088      1098      1108      1118      1128      1138      1148      1158      1168      1178      1188      1198      1208      1218      1228      1238      1248 |    1258      1268      1278      1288      1298      1308      1318      1328      1338      1348      1358      1368      1378    | 1388      1398      1408      1418      1428      1438      1448      1458      1468      1478      1488      1498      1508      1518      1528      1538      1548     |1566      1576     |1586      1596      1606      1616      1626      1636        
                                                                                                                                                            180-MSE                     208|                                      264-MSE                                                                                                        382-MSE                                     426-MSE                                          475-MSE                                                                                                                                                                                                                                                             735|               765-MSE        780-MSE                                                                          861-MSE            880-MSE                                                   938|                                991-MSE                    1019-MSE                                                                                                                                                                                                      1225-MSE                 1250-MSE                           1285-MSE                                           1336-MSE 1345-MSE                              1383-MSE                                                                                                                                                                   1554|       1574-MSE   |                                       1625-MSE               
                                                                                                                                                                                         223-MSE                                   265|                                                                                                                                                                                                           479-MSE                                                                                                                                                                                                                                                          747                                                                                                                                                                                             956                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   1563               1582-MSE                                                          
                                                                                                                                                                                                                                    273
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4U48)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4U48)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4U48)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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UniProtKB/TrEMBL
        Q8ZN46_SALTY | Q8ZN46: 4u4j 4u59

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