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(-) Description

Title :  CYRSTAL STRUCTURE OF SLIT-ROBO RHO GTPASE-ACTIVATING PROTEIN 2 FRAGMENT
 
Authors :  Y. Opatowsky, J. Guez-Hadad
Date :  19 Nov 14  (Deposition) - 04 Nov 15  (Release) - 18 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.73
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Srgap2, Sh3, Ligand Binding, Robo1, Nuclear, Plasma Membrane, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Guez-Haddad, M. Sporny, Y. Sasson, L. Gevorkyan-Airapetov, N. Lahav-Mankovski, D. Margulies, J. Radzimanowski, Y. Opatowsky
The Neuronal Migration Factor Srgap2 Achieves Specificity I Ligand Binding Through A Two-Component Molecular Mechanism.
Structure V. 23 1989 2015
PubMed-ID: 26365803  |  Reference-DOI: 10.1016/J.STR.2015.08.009

(-) Compounds

Molecule 1 - SLIT-ROBO RHO GTPASE-ACTIVATING PROTEIN 2
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 729-815
    Gene: SRGAP2, ARHGAP34, FNBP2, KIAA0456, SRGAP2A
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: SRGAP2, FORMIN-BINDING PROTEIN 2, RHO GTPASE-ACTIVATING PROTEIN 34

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4RUG)

(-) Sites  (0, 0)

(no "Site" information available for 4RUG)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RUG)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Gly A:724 -Ala A:725
2Asp A:789 -Gly A:790

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RUG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RUG)

(-) Exons   (0, 0)

(no "Exon" information available for 4RUG)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:86
                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee..................eeeeeeeee..eeeeee..eeeeee...eee.....hhhhhhh..hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 4rug A 724 GAMGSEPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTEDGVVERSSPKSEIEVISEPPE 809
                                   733       743       753       763       773       783       793       803      


Chain B from PDB  Type:PROTEIN  Length:81
                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..................eeeeeeeee..eeeeee..eeeeee...eee....hhhhhhh..hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------- Transcript
                 4rug B 728 SEPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTDGVVERSSPKSEIEVISEPPE 809
                                   737       747       757       767       777       787|      798       808 
                                                                                     787|                    
                                                                                      789
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RUG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RUG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RUG)

(-) Gene Ontology  (33, 33)

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  Cis Peptide Bonds
    Asp A:789 - Gly A:790   [ RasMol ]  
    Gly A:724 - Ala A:725   [ RasMol ]  
 
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SRGP2_HUMAN | O75044: 2dl8 4rtt 5i6j

(-) Related Entries Specified in the PDB File

4rtt