4RNH - JenaLib

Title :   PAMORA TANDEM DIGUANYLATE CYCLASE - PHOSPHODIESTERASE, C-DI-GMP COMPLEX

Authors :   C. W. Phippen, I. Tews

Date :   24 Oct 14 (Deposition) - 19 Nov 14 (Release) - 22 Apr 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.45

Chains :   Asym. Unit : A
Biol. Unit 1: A  (2x)

Keywords :   Tandem Ggdef And Eal Domain, Diguanylate Cyclase, Phosphodiesterase, Gtp, C-Di-Gmp, Transferase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. W. Phippen, H. Mikolajek, H. G. Schlaefli, C. W. Keevil, J. S. Webb, I. Tews
Formation And Dimerization Of The Phosphodiesterase Active Site Of The Pseudomonas Aeruginosa Mora, A Bi-Functional C-Di-Gmp Regulator.
Febs Lett. V. 588 4631 2014
PubMed-ID: 25447517 | Reference-DOI: 10.1016/J.FEBSLET.2014.11.002

Compounds

Molecule 1 - MOTILITY REGULATOR
	Chains	:	A
	EC Number	:	2.7.7.65, 3.1.4.52
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28A
	Expression System Strain	:	BL21 (DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	GGDEF DOMAIN, EAL DOMAIN, UNP RESIDUES 978-1409
	Gene	:	MORA, PA4601
	Organism Scientific	:	PSEUDOMONAS AERUGINOSA PAO1
	Organism Taxid	:	208964
	Strain	:	PA01

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 3)

Asymmetric Unit (2, 3)

No.	Name	Count	Type	Full Name
1	C2E	1	Ligand/Ion	9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)
2	MG	2	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	C2E	2	Ligand/Ion	9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU A:1189 , ASN A:1248 , GLU A:1280 , ASP A:1310 , C2E A:1503 , HOH A:1619	BINDING SITE FOR RESIDUE MG A 1501
2	AC2	SOFTWARE	ASP A:1311 , C2E A:1503 , HOH A:1615	BINDING SITE FOR RESIDUE MG A 1502
3	AC3	SOFTWARE	GLN A:1175 , GLU A:1189 , LEU A:1191 , LEU A:1192 , ARG A:1193 , PRO A:1204 , LEU A:1224 , ASN A:1248 , GLN A:1253 , ASP A:1310 , ASP A:1311 , ARG A:1334 , GLU A:1367 , GLY A:1368 , GLU A:1370 , GLY A:1388 , TYR A:1389 , MG A:1501 , MG A:1502 , HOH A:1613 , HOH A:1615 , HOH A:1619 , HOH A:1626 , HOH A:1720	BINDING SITE FOR RESIDUE C2E A 1503

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:423
                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhhh.eeeeeeeeee...hhhhhhhhhhhhhhhhhhhh....eeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhh...........eeeeeeeee.....hhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeee.....eeeeeeeeeeee...eeehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhh.hhhhhhhhhhhhhh.hhh.eeeeeehhhhhhhhhhhhhhhhhhhhh..eeeeeee.....hhhhhhhh...eeeehhhhhhh...hhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhh...ee.hhhhh...hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4rnh A  977 MAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYA 1405
                                   986       996      1006      1016   || 1032      1042      1052      1062      1072      1082      1092      1102      1112      1122      1132      1142      1152      1162      1172      1182      1192      1202      1212      1222      1232      1242      1252      1262      1272      1282      1292      1302      1312      1322      1332      1342      1352      1362      1372      1382      1392      1402   
                                                                    1020|                                                                                                                                                                                                                                                                                                                                                                                          
                                                                     1027

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Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (9, 9)

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Description