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(-)Asym./Biol. Unit
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(-) Description

Title :  PAMORA DIMERIC PHOSPHODIESTERASE. APO FORM
 
Authors :  C. W. Phippen, I. Tews
Date :  24 Oct 14  (Deposition) - 19 Nov 14  (Release) - 22 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.17
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Eal Domain, Phosphodiesterase, C-Di-Gmp, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. W. Phippen, H. Mikolajek, H. G. Schlaefli, C. W. Keevil, J. S. Webb, I. Tews
Formation And Dimerization Of The Phosphodiesterase Active Site Of The Pseudomonas Aeruginosa Mora, A Bi-Functional C-Di-Gmp Regulator.
Febs Lett. V. 588 4631 2014
PubMed-ID: 25447517  |  Reference-DOI: 10.1016/J.FEBSLET.2014.11.002

(-) Compounds

Molecule 1 - MOTILITY REGULATOR
    Chains: A, B
    EC Number: 3.1.4.52
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: EAL DOMAIN, UNP RESIDUES 1145-1409
    Gene: MORA, PA4601
    Organism Scientific: PSEUDOMONAS AERUGINOSA PAO1
    Organism Taxid: 208964
    Strain: PA01

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4RNI)

(-) Sites  (0, 0)

(no "Site" information available for 4RNI)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RNI)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Leu A:190 -Pro A:191
2Phe B:162 -Gly B:163
3Leu B:190 -Pro B:191

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RNI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RNI)

(-) Exons   (0, 0)

(no "Exon" information available for 4RNI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:253
                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh..eeeeeeeeee.....eeeeeeeeeeee...ee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhh.hhhhhhhhhhhhhh.hhh.eeeeeehhhhhhhhhhhhhhhhhhhhh..eeeee.......hhhhhhhh...eeeehhhhhh....hhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhh...ee.hhhhh..eehhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rni A   4 RLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYAS 256
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253   


Chain B from PDB  Type:PROTEIN  Length:254
                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh.eeeeeeeeee.....eeeeeeeeeeee...ee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhh..hhhhhhhhhhhhhh.hhh.eeeeeehhhhhhhhhhhhhhhhhhhhh..eeeeeee.....hhhhhh.....eeeehhhhhh....hhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhh...ee.hhhhh...hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rni B   3 ERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYAS 256
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RNI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RNI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RNI)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Leu A:190 - Pro A:191   [ RasMol ]  
    Leu B:190 - Pro B:191   [ RasMol ]  
    Phe B:162 - Gly B:163   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9HVI8_PSEAE | Q9HVI8: 4rnf 4rnh 4rnj

(-) Related Entries Specified in the PDB File

4rnf 4rnh 4rnj