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(-) Description

Title :  CRYSTAL STRUCTURE OF RV1600 ENCODED AMINOTRANSFERASE FROM MYCOBACTERIUM TUBERCULOSIS
 
Authors :  N. Nasir, A. Anant, R. Vyas, B. K. Biswal
Date :  10 Sep 14  (Deposition) - 23 Sep 15  (Release) - 23 Sep 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.59
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Histidinol Phosphate Aminotransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Nasir, A. Anant, R. Vyas, B. K. Biswal
Crystal Structure Of Rv1600 Encoded Aminotransferase From Mycobacterium Tuberculosis
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HISTIDINOL-PHOSPHATE AMINOTRANSFERASE
    Chains: A, B
    EC Number: 2.6.1.9
    Engineered: YES
    Expression System: MYCOBACTERIUM SMEGMATIS
    Expression System Strain: MC24517
    Expression System Taxid: 1772
    Expression System Vector Type: PLASMID
    Gene: HISC
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS H37RV
    Organism Taxid: 83332
    Synonym: IMIDAZOLE ACETOL-PHOSPHATE TRANSAMINASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4RAE)

(-) Sites  (0, 0)

(no "Site" information available for 4RAE)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RAE)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Ala A:23 -Pro A:24
2Val A:124 -Pro A:125
3Ser A:173 -Pro A:174
4Gly A:317 -Glu A:318
5Ser B:173 -Pro B:174
6Asn B:176 -Pro B:177

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RAE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RAE)

(-) Exons   (0, 0)

(no "Exon" information available for 4RAE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:367
                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhh....hhhhhh..ee..........hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh...hhh.eeee.hhhhhhhhhhhhhh....eeeeee.............eeeeee.........hhhhhhhhhhhhh..eeeee..........hhhhhhhhhh....eeeee.hhhhhh...hhhhhhhhh...eeeeee............eeee.hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee......eeeee...hhhhhhhhhhhh.ee.........eeee..hhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rae A   6 HPVTLDDLPLRADLRGKAPYGAPQLAVPVRLNTNENPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFVPSYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPGIAIVDEAYGEFSSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAALRHSDDTLSSVAALIAERERVTTSLNDMGFRVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDVGIPGYLRATTGLAEENDAFLRASARIATDLVPV 372
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       


Chain B from PDB  Type:PROTEIN  Length:365
                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhh..hhhhh.............ee..........hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh...hhh.eeee.hhhhhhhhhhhhhh....eeeeee.............eeeeee.........hhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhh..eeeee..hhhhh...hhhhhh......eeeeee............eeee.hhhhhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eeeee...hhhhhhhhhhhh.ee.eeeee..eeeee..hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rae B   6 HPVTLDDLPLRADLRGKAPYGAPQLAVPVRLNTNENPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFVPSYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPGIAIVDEAYGEFSSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAALRHSDDTLSSVAALIAERERVTTSLNDMGFRVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDVGIPGYLRATTGLAEENDAFLRASARIATDLV 370
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RAE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RAE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RAE)

(-) Gene Ontology  (13, 23)

Asymmetric/Biological Unit(hide GO term definitions)

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  Sites
(no "Sites" information available for 4rae)
 
  Cis Peptide Bonds
    Ala A:23 - Pro A:24   [ RasMol ]  
    Asn B:176 - Pro B:177   [ RasMol ]  
    Gly A:317 - Glu A:318   [ RasMol ]  
    Ser A:173 - Pro A:174   [ RasMol ]  
    Ser B:173 - Pro B:174   [ RasMol ]  
    Val A:124 - Pro A:125   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HIS8_MYCTU | P9WML7: 4r8d
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