4QIS - JenaLib

Title :   CRYSTAL STRUCTURE OF NITROALKANE OXIDASE FROM PSEUDOMONAS AERUGINOSA

Authors :   Y. M. Chi, J. H. Lee

Date :   02 Jun 14 (Deposition) - 08 Jul 15 (Release) - 08 Jul 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.91

Chains :   Asym./Biol. Unit : A,B

Keywords :   Tim Barrel, Fmn Binding, Cytosol, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. M. Chi, J. H. Lee
Crystal Structures And Reaction Mechanisms Of Nitroalkane Oxidase (Nao) From Pseudomonas Aeruginosa
To Be Published
PubMed: search

Compounds

Molecule 1 - NITRONATE MONOOXYGENASE FAMILY PROTEIN
	Chains	:	A, B
	EC Number	:	1.7.3.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28A
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	M801_4200
	Organism Scientific	:	PSEUDOMONAS AERUGINOSA
	Organism Taxid	:	1352354
	Strain	:	PAO581
	Synonym	:	NAO, NITROALKANE OXIDASE

Structural Features

Chains, Units

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (1, 2)

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ALA A:18 , PRO A:19 , MET A:20 , LEU A:21 , VAL A:23 , ASN A:69 , PHE A:71 , HIS A:133 , GLN A:176 , ALA A:180 , GLY A:181 , GLY A:217 , GLY A:218 , GLN A:237 , MET A:238 , GLY A:239 , THR A:240 , TYR A:254 , TRP A:325 , HOH A:502 , HOH A:504 , HOH A:535	BINDING SITE FOR RESIDUE FMN A 401
2	AC2	SOFTWARE	ALA B:18 , PRO B:19 , MET B:20 , LEU B:21 , ASN B:69 , PHE B:71 , HIS B:133 , GLN B:176 , ALA B:180 , GLY B:181 , GLY B:217 , GLY B:218 , GLN B:237 , MET B:238 , GLY B:239 , THR B:240 , TYR B:254 , TRP B:325 , GLY B:327 , HOH B:520 , HOH B:521 , HOH B:546 , HOH B:566	BINDING SITE FOR RESIDUE FMN B 401

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:346
                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh.....eee.......hhhhhhhhhhh...eeee....hhhhhhhhhhhhhh.....eeeeee.......hhhhhhhhhhhhhhhhhhh...................hhhhhhhhhh..eeeee....hhhhhhhhhhh..eeeeee.hhhhhhhhhhh...eeeee.....ee....hhhhh....hhhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeeehhhhhh......hhhhhhhhhhhhhhh.eee.......eee....................hhhhhhhhhhhhhhhh.............hhhhh...hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qis A   4 RFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALARELPAAELLRTLVEEL 349
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343

Chain B from PDB  Type:PROTEIN  Length:349
                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhh....eee.......hhhhhhhhhhh...eeee....hhhhhhhhhhhhhh.....eeeeee.......hhhhhhhhhhhhhhhhhhh...................hhhhhhhhhh..eeeee....hhhhhhhhhh...eeeeee.hhhhhhhhhhhh..eeeee.....ee....hhhhh....hhhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeeehhhhh.......hhhhhhhhhhhhhhh.eee.......eee....................hhhhhhhhhhhhhhhh.............hhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qis B   2 TDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALARELPAAELLRTLVEELR 350
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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	Cis Peptide Bonds
		Tyr A:299 - Pro A:300	[ RasMol ]
		Tyr B:299 - Pro B:300	[ RasMol ]

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Description