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(-) Description

Title :  CRYSTAL STRUCTURE OF THE SECOND AND THIRD FIBRONECTIN F1 MODULES IN COMPLEX WITH A FRAGMENT OF BBK32 FROM BORRELIA BURGDORFERI
 
Authors :  G. Harris, J. R. Potts
Date :  28 Mar 14  (Deposition) - 02 Jul 14  (Release) - 27 Aug 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.96
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Fibronectin Type One, Cell Adhesion, Bacterial Adhesion, Fibronectin Binding, Extracellular Matrix, Plasma (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Harris, W. Ma, L. M. Maurer, J. R. Potts, D. F. Mosher
Borrelia Burgdorferi Protein Bbk32 Binds To Soluble Fibronectin Via The N-Terminal 70-Kda Region, Causing Fibronectin To Undergo Conformational Extension.
J. Biol. Chem. V. 289 22490 2014
PubMed-ID: 24962582  |  Reference-DOI: 10.1074/JBC.M114.578419

(-) Compounds

Molecule 1 - FIBRONECTIN
    Chains: A
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Taxid: 4922
    Fragment: 2FN1-3FN1, UNP RESIDUES 93-182
    Gene: FN1, FN
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: FN, COLD-INSOLUBLE GLOBULIN, CIG, ANASTELLIN, UGL-Y1, UGL- Y2, UGL-Y3
 
Molecule 2 - FIBRONECTIN-BINDING PROTEIN BBK32
    Chains: B
    Engineered: YES
    Fragment: BBK32TWL, UNP RESIDUES 175-189
    Organism Scientific: BORRELIA BURGDORFERI
    Organism Taxid: 224326
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP

(-) Sites  (0, 0)

(no "Site" information available for 4PZ5)

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:66 -A:94
2A:92 -A:104
3A:110 -A:138
4A:136 -A:148

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4PZ5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PZ5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PZ5)

(-) Exons   (0, 0)

(no "Exon" information available for 4PZ5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:89
                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....eeee...eeeeee..eeeeeeeee....eeeee...ee......ee...eeeee......eeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                 4pz5 A  63 EETCFDKYTGNTYRVGDTYERPKDSMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPI 151
                                    72        82        92       102       112       122       132       142         


Chain B from PDB  Type:PROTEIN  Length:15
                                               
               SCOP domains --------------- SCOP domains
               CATH domains --------------- CATH domains
               Pfam domains --------------- Pfam domains
         Sec.struct. author ......eeee..... Sec.struct. author
                 SAPs(SNPs) --------------- SAPs(SNPs)
                    PROSITE --------------- PROSITE
                 Transcript --------------- Transcript
                 4pz5 B 174 xSISYTDEIEEEDYD 188
                            |      183     
                          174-ACE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PZ5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PZ5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PZ5)

(-) Gene Ontology  (63, 63)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FINC_HUMAN | P02751: 1e88 1e8b 1fbr 1fna 1fnf 1fnh 1j8k 1o9a 1oww 1q38 1qgb 1qo6 1ttf 1ttg 2cg6 2cg7 2ck2 2cku 2ec3 2fn2 2fnb 2gee 2h41 2h45 2ha1 2mnu 2n1k 2ocf 2rky 2rkz 2rl0 3cal 3ejh 3gxe 3m7p 3mql 3r8q 3t1w 3zrz 4gh7 4je4 4jeg 4lxo 4mmx 4mmy 4mmz 5dc0 5dc4 5dc9 5dft 5j6z 5j7c

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