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(-) Description

Title :  THE STRUCTURE OF A CHICKEN ANTI-CARDIAC TROPONIN I SCFV
 
Authors :  P. J. Conroy, R. H. P. Law, S. Gillgunn, S. Hearty, T. T. Caradoc-Davies, R. J. O'Kennedy, J. C. Whisstock
Date :  12 Mar 14  (Deposition) - 23 Apr 14  (Release) - 14 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.35
Chains :  Asym./Biol. Unit :  A
Keywords :  Recombinant Antibody Chicken, Cardiac Troponin I, Scfv, Immunoglobulin, Phage Display, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. J. Conroy, R. H. Law, S. Gilgunn, S. Hearty, T. T. Caradoc-Davies, G. Lloyd, R. J. O'Kennedy, J. C. Whisstock
Reconciling The Structural Attributes Of Avian Antibodies.
J. Biol. Chem. V. 289 15384 2014
PubMed-ID: 24737329  |  Reference-DOI: 10.1074/JBC.M114.562470

(-) Compounds

Molecule 1 - ANTIBODY SCFV 180
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PCOMB3X
    Expression System Taxid: 562
    Expression System Vector Type: PHAGEMID
    Organism Scientific: GALLUS GALLUS
    Organism Taxid: 9031

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4P48)

(-) Sites  (0, 0)

(no "Site" information available for 4P48)

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:20 -A:89
2A:150 -A:224

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4P48)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4P48)

(-) Exons   (0, 0)

(no "Exon" information available for 4P48)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:235
                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee....eeeeee.............eeeee.......eeee.............eeeeee..eeeeeee..hhhhheeeeeee........ee...eeeee....eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee.......ee.......eeeeee....eeeeee...hhhhheeeeeeee...........eeee...eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4p48 A   1 ALTQPSSVSANPGGTVEITCSGGGRYYDGSYYYGWYQQKSPGSAPVTVIYENTKRPSNIPSRFSGSKSGSTATLTITGVRAEDEAVYYCGSADDNMNPTIFGAGTTLTVLGALTLDESGGGLQTPGGALSLVCKASGFTFSSYGMQWVRQAPGKGLEWVAGIQNDDTGTYYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKDASSDGGYGGDSIDAWGHGTEVIVSS 252
                                    10        20        30        40        50        60        70        80        90       100       110||     137       147       157       167       177       187       197       207       217       227       237       247     
                                                                                                                                        111|                                                                                                                           
                                                                                                                                         129
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4P48)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

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(-) Related Entries Specified in the PDB File

4p49