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(-) Description

Title :  SATELLITE TOBACCO MOSAIC VIRUS REFINED TO 1.4 A RESOLUTION USING NON-CRYSTALLOGRAPHIC SYMMETRY RESTRAINTS
 
Authors :  S. B. Larson, J. S. Day, A. Mcpherson
Date :  07 Feb 14  (Deposition) - 10 Sep 14  (Release) - 01 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.45
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c,d,e,f,g,h,i,j,k,l,m,n,o,p,q,r,s,t,u,v,w,x,y,z,1,2,3,4,5,6,7,8
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c,d,e,f,g,h,i,j,k,l,m,n,o,p,q,r,s,t,u,v,w,x,y,z,1,2,3,4,5,6,7,8  (4x)
Keywords :  Double-Helix Rna, Protein-Rna Complex, Swiss Jelly-Roll Beta Barrel, Virus-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. B. Larson, J. S. Day, A. Mcpherson
Satellite Tobacco Mosaic Virus Refined To 1. 4 Angstrom Resolution.
Acta Crystallogr. , Sect. D V. 70 2316 2014
PubMed-ID: 25195746  |  Reference-DOI: 10.1107/S1399004714013789
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - COAT PROTEIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
    Organism Common: STMV
    Organism Scientific: SATELLITE TOBACCO MOSAIC VIRUS
    Organism Taxid: 12881
    Other Details: GROWN IN NICOTIANA TOBACUM PLANTS
 
Molecule 2 - RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')
    Chains: P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d
    Organism Common: STMV
    Organism Scientific: SATELLITE TOBACCO MOSAIC VIRUS
    Organism Taxid: 12881
    Other Details: ARBITRARY RNA ADENINE NUCLEOTIDE DECAMER
 
Molecule 3 - RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
    Chains: e, f, g, h, i, j, k, l, m, n, o, p, q, r, s
    Organism Common: STMV
    Organism Scientific: SATELLITE TOBACCO MOSAIC VIRUS
    Organism Taxid: 12881
    Other Details: ARBITRARY RNA URIDINE NUCLEOTIDE DECAMER
 
Molecule 4 - RNA (5'-R(P*UP*U)-3')
    Chains: t, u, v, w, x, y, z, 1, 2, 3, 4, 5, 6, 7, 8
    Organism Common: STMV
    Organism Scientific: SATELLITE TOBACCO MOSAIC VIRUS
    Organism Taxid: 12881
    Other Details: ARBITRARY RNA URIDINE NUCLEOTIDE DIMER

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960
Asymmetric Unit : ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz12345678
Biological Unit 1 (4x): ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz12345678

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 41)

Asymmetric Unit (4, 41)
No.NameCountTypeFull Name
1MG3Ligand/IonMAGNESIUM ION
2NA17Ligand/IonSODIUM ION
3PO43Ligand/IonPHOSPHATE ION
4SO418Ligand/IonSULFATE ION
Biological Unit 1 (2, 84)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2NA-1Ligand/IonSODIUM ION
3PO412Ligand/IonPHOSPHATE ION
4SO472Ligand/IonSULFATE ION

(-) Sites  (41, 41)

Asymmetric Unit (41, 41)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:115 , ASN A:117 , ASN B:115 , ASN B:117 , ASN C:115 , ASN C:117 , ASN D:115 , ASN D:117 , ASN E:115 , ASN E:117 , SO4 E:201 , MG E:203BINDING SITE FOR RESIDUE PO4 A 201
02AC2SOFTWAREPHE A:93 , ARG A:95 , HOH A:519 , HOH A:560 , HOH A:636 , HOH A:700 , HOH A:709 , HOH A:743BINDING SITE FOR RESIDUE SO4 A 202
03AC3SOFTWAREASP A:68 , ASP O:68 , NA O:202 , HOH O:337 , HOH O:434BINDING SITE FOR RESIDUE NA A 203
04AC4SOFTWAREARG B:95 , HOH B:325 , HOH B:367 , HOH B:413BINDING SITE FOR RESIDUE SO4 B 201
05AC5SOFTWAREASP B:68 , HOH B:516BINDING SITE FOR RESIDUE NA B 202
06AC6SOFTWAREARG B:66 , ASP B:68 , HOH B:326 , HOH B:426BINDING SITE FOR RESIDUE NA B 203
07AC7SOFTWAREARG C:95 , HOH C:322 , HOH C:365BINDING SITE FOR RESIDUE SO4 C 201
08AC8SOFTWAREASP C:68 , HOH C:498 , ASP N:68 , HOH N:326BINDING SITE FOR RESIDUE NA C 202
09AC9SOFTWAREPHE D:93 , ARG D:95 , HOH D:325 , HOH D:367 , HOH D:442 , HOH D:496BINDING SITE FOR RESIDUE SO4 D 201
10BC1SOFTWAREASP D:68 , ASP H:68 , SER H:69 , NA H:203 , HOH H:325 , HOH H:427BINDING SITE FOR RESIDUE NA D 202
11BC2SOFTWAREASN A:117 , PO4 A:201 , HOH A:564 , ASN B:117 , HOH B:371 , ASN C:117 , HOH C:369 , ASN D:117 , HOH D:371 , ASN E:117 , HOH E:306 , HOH E:307 , HOH E:310 , HOH E:315BINDING SITE FOR RESIDUE SO4 E 201
12BC3SOFTWAREARG E:95 , HOH E:333 , HOH E:375 , HOH E:500 , HOH E:510 , HOH E:532BINDING SITE FOR RESIDUE SO4 E 202
13BC4SOFTWAREPO4 A:201BINDING SITE FOR RESIDUE MG E 203
14BC5SOFTWAREASP E:68 , ASP F:68 , SER F:69 , NA F:203 , HOH F:325 , HOH F:423BINDING SITE FOR RESIDUE NA E 204
15BC6SOFTWAREASP E:68 , HOH E:496 , ASP F:68BINDING SITE FOR RESIDUE NA E 205
16BC7SOFTWAREPHE F:93 , ARG F:95 , HOH F:324 , HOH F:365 , HOH F:496BINDING SITE FOR RESIDUE SO4 F 201
17BC8SOFTWAREPO4 H:201BINDING SITE FOR RESIDUE MG F 202
18BC9SOFTWAREASP E:68 , SER E:69 , NA E:204 , HOH E:334 , HOH E:432 , ASP F:68BINDING SITE FOR RESIDUE NA F 203
19CC1SOFTWAREASN F:117 , HOH F:369 , ASN G:117 , HOH G:307 , HOH G:308 , HOH G:310 , HOH G:378 , HOH G:575 , ASN H:117 , PO4 H:201 , HOH H:371 , ASN I:117 , HOH I:370 , ASN J:117 , HOH J:377BINDING SITE FOR RESIDUE SO4 G 201
20CC2SOFTWAREPHE G:93 , ARG G:95 , HOH G:330 , HOH G:374BINDING SITE FOR RESIDUE SO4 G 202
21CC3SOFTWAREARG G:66 , ASP G:68 , HOH G:331 , HOH G:433BINDING SITE FOR RESIDUE NA G 203
22CC4SOFTWAREASN F:115 , ASN F:117 , MG F:202 , ASN G:115 , ASN G:117 , SO4 G:201 , ASN H:115 , ASN H:117 , ASN I:115 , ASN I:117 , ASN J:115 , ASN J:117BINDING SITE FOR RESIDUE PO4 H 201
23CC5SOFTWAREPHE H:93 , ARG H:95 , HOH H:324 , HOH H:367 , HOH H:566 , HOH H:567BINDING SITE FOR RESIDUE SO4 H 202
24CC6SOFTWAREASP D:68 , SER D:69 , NA D:202 , HOH D:326 , HOH D:511 , ASP H:68BINDING SITE FOR RESIDUE NA H 203
25CC7SOFTWAREPHE I:93 , ARG I:95 , HOH I:324 , HOH I:441 , HOH I:491 , HOH I:493 , HOH I:519 , HOH I:520BINDING SITE FOR RESIDUE SO4 I 201
26CC8SOFTWAREASP I:68 , HOH I:422 , ASP M:68 , HOH M:327BINDING SITE FOR RESIDUE NA I 202
27CC9SOFTWAREARG J:95 , HOH J:331 , HOH J:373 , HOH J:450 , HOH J:539BINDING SITE FOR RESIDUE SO4 J 201
28DC1SOFTWAREARG J:66 , ASP J:68 , HOH J:571 , ASP K:68 , NA K:203 , HOH K:328BINDING SITE FOR RESIDUE NA J 202
29DC2SOFTWAREARG K:95 , HOH K:327 , HOH K:445BINDING SITE FOR RESIDUE SO4 K 201
30DC3SOFTWAREPO4 N:201BINDING SITE FOR RESIDUE MG K 202
31DC4SOFTWAREASP J:68 , NA J:202 , HOH J:332 , ASP K:68 , HOH K:307 , HOH K:328BINDING SITE FOR RESIDUE NA K 203
32DC5SOFTWAREPHE L:93 , ARG L:95 , HOH L:5027 , HOH L:5069 , HOH L:5148 , HOH L:5203 , HOH L:5264BINDING SITE FOR RESIDUE SO4 L 201
33DC6SOFTWAREASP L:68 , HOH L:5028BINDING SITE FOR RESIDUE NA L 202
34DC7SOFTWAREASN K:117 , HOH K:374 , ASN L:117 , HOH L:5007 , HOH L:5073 , ASN M:117 , HOH M:301 , HOH M:306 , HOH M:373 , ASN N:117 , PO4 N:201 , HOH N:371 , ASN O:117 , HOH O:379BINDING SITE FOR RESIDUE SO4 M 201
35DC8SOFTWAREPHE M:93 , ARG M:95 , HOH M:326 , HOH M:369 , HOH M:502 , HOH M:531 , HOH M:562 , HOH M:586BINDING SITE FOR RESIDUE SO4 M 202
36DC9SOFTWAREASP I:68 , HOH I:325 , ASP M:68 , HOH M:327 , HOH M:427BINDING SITE FOR RESIDUE NA M 203
37EC1SOFTWAREASN K:115 , ASN K:117 , MG K:202 , ASN L:115 , ASN L:117 , ASN M:115 , ASN M:117 , SO4 M:201 , ASN N:115 , ASN N:117 , ASN O:115 , ASN O:117BINDING SITE FOR RESIDUE PO4 N 201
38EC2SOFTWAREPHE N:93 , ARG N:95 , HOH N:325 , HOH N:443 , HOH N:514BINDING SITE FOR RESIDUE SO4 N 202
39EC3SOFTWAREASP C:68 , HOH C:323 , ASP N:68 , HOH N:424BINDING SITE FOR RESIDUE NA N 203
40EC4SOFTWAREPHE O:93 , ARG O:95 , HOH O:317 , HOH O:336 , HOH O:375 , HOH O:456 , HOH O:524 , HOH O:572BINDING SITE FOR RESIDUE SO4 O 201
41EC5SOFTWAREASP A:68 , NA A:203 , HOH A:520 , HOH A:725 , ASP O:68BINDING SITE FOR RESIDUE NA O 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OQ9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OQ9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OQ9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OQ9)

(-) Exons   (0, 0)

(no "Exon" information available for 4OQ9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain 1 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 1 195 UU 196


Chain 2 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 2 195 UU 196


Chain 3 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 3 195 UU 196


Chain 4 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 4 195 UU 196


Chain 5 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 5 195 UU 196


Chain 6 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 6 195 UU 196


Chain 7 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 7 195 UU 196


Chain 8 from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 8 195 UU 196


Chain A from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.............eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 A  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain B from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 B  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain C from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 C  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain D from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.......eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 D  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain E from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.............eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 E  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain F from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.............eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.......eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 F  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain G from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 G  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain H from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 H  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain I from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 I  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain J from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.............eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 J  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain K from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.............eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 K  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain L from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 L  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain M from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 M  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain N from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....................eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.......eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 N  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain O from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.............eeeeeeeeee......eeee.hhhhhhhhh.....eeeeeeeeeee..........eeeeee..........eeee........eeeee.hhhhh.ee....eeeeeee...eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4oq9 O  16 NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155    


Chain P from PDB  Type:RNA  Length:10
                                          
                 4oq9 P 161 AAAAAAAAAA 170
                                   170


Chain Q from PDB  Type:RNA  Length:10
                                          
                 4oq9 Q 161 AAAAAAAAAA 170
                                   170


Chain R from PDB  Type:RNA  Length:10
                                          
                 4oq9 R 161 AAAAAAAAAA 170
                                   170


Chain S from PDB  Type:RNA  Length:10
                                          
                 4oq9 S 161 AAAAAAAAAA 170
                                   170


Chain T from PDB  Type:RNA  Length:10
                                          
                 4oq9 T 161 AAAAAAAAAA 170
                                   170


Chain U from PDB  Type:RNA  Length:10
                                          
                 4oq9 U 161 AAAAAAAAAA 170
                                   170


Chain V from PDB  Type:RNA  Length:10
                                          
                 4oq9 V 161 AAAAAAAAAA 170
                                   170


Chain W from PDB  Type:RNA  Length:10
                                          
                 4oq9 W 161 AAAAAAAAAA 170
                                   170


Chain X from PDB  Type:RNA  Length:10
                                          
                 4oq9 X 161 AAAAAAAAAA 170
                                   170


Chain Y from PDB  Type:RNA  Length:10
                                          
                 4oq9 Y 161 AAAAAAAAAA 170
                                   170


Chain Z from PDB  Type:RNA  Length:10
                                          
                 4oq9 Z 161 AAAAAAAAAA 170
                                   170


Chain a from PDB  Type:RNA  Length:10
                                          
                 4oq9 a 161 AAAAAAAAAA 170
                                   170


Chain b from PDB  Type:RNA  Length:10
                                          
                 4oq9 b 161 AAAAAAAAAA 170
                                   170


Chain c from PDB  Type:RNA  Length:10
                                          
                 4oq9 c 161 AAAAAAAAAA 170
                                   170


Chain d from PDB  Type:RNA  Length:10
                                          
                 4oq9 d 161 AAAAAAAAAA 170
                                   170


Chain e from PDB  Type:RNA  Length:10
                                          
                 4oq9 e 181 UUUUUUUUUU 190
                                   190


Chain f from PDB  Type:RNA  Length:10
                                          
                 4oq9 f 181 UUUUUUUUUU 190
                                   190


Chain g from PDB  Type:RNA  Length:10
                                          
                 4oq9 g 181 UUUUUUUUUU 190
                                   190


Chain h from PDB  Type:RNA  Length:10
                                          
                 4oq9 h 181 UUUUUUUUUU 190
                                   190


Chain i from PDB  Type:RNA  Length:10
                                          
                 4oq9 i 181 UUUUUUUUUU 190
                                   190


Chain j from PDB  Type:RNA  Length:10
                                          
                 4oq9 j 181 UUUUUUUUUU 190
                                   190


Chain k from PDB  Type:RNA  Length:10
                                          
                 4oq9 k 181 UUUUUUUUUU 190
                                   190


Chain l from PDB  Type:RNA  Length:10
                                          
                 4oq9 l 181 UUUUUUUUUU 190
                                   190


Chain m from PDB  Type:RNA  Length:10
                                          
                 4oq9 m 181 UUUUUUUUUU 190
                                   190


Chain n from PDB  Type:RNA  Length:10
                                          
                 4oq9 n 181 UUUUUUUUUU 190
                                   190


Chain o from PDB  Type:RNA  Length:10
                                          
                 4oq9 o 181 UUUUUUUUUU 190
                                   190


Chain p from PDB  Type:RNA  Length:10
                                          
                 4oq9 p 181 UUUUUUUUUU 190
                                   190


Chain q from PDB  Type:RNA  Length:10
                                          
                 4oq9 q 181 UUUUUUUUUU 190
                                   190


Chain r from PDB  Type:RNA  Length:10
                                          
                 4oq9 r 181 UUUUUUUUUU 190
                                   190


Chain s from PDB  Type:RNA  Length:10
                                          
                 4oq9 s 181 UUUUUUUUUU 190
                                   190


Chain t from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 t 195 UU 196


Chain u from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 u 195 UU 196


Chain v from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 v 195 UU 196


Chain w from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 w 195 UU 196


Chain x from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 x 195 UU 196


Chain y from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 y 195 UU 196


Chain z from PDB  Type:DNA/RNA  Length:2
                                  
                 4oq9 z 195 UU 196
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        COAT_STMV | P17574: 1a34 4nia 4oq8

(-) Related Entries Specified in the PDB File

1a34 THE SAME STRUCTURE REFINED AGAINST ROOM TEMPERATURE DATA USING STRICT ICOSAHEDRAL SYMMETRY CONSTRAINTS
4nia THE SAME STRUCTURE REFINED AGAINST ROOM TEMPERATURE DATA USING NCS RESTRAINTS
4oq8 THE SAME STRUCTURE REFINED AGAINST 100 K TEMPERATURE DATA USING STRICT ICOSAHEDRAL SYMMETRY CONSTRAINTS