4OGN - JenaLib

Title :   CO-CRYSTAL STRUCTURE OF MDM2 WITH INHBITOR COMPOUND 3

Authors :   P. L. Shaffer, X. Huang, P. Yakowec, A. M. Long

Date :   16 Jan 14 (Deposition) - 02 Apr 14 (Release) - 18 Jun 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.38

Chains :   Asym./Biol. Unit : A

Keywords :   P53, Protein-Protein Interaction, Ligase-Ligase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Z. Gonzalez, Z. Li, H. P. Beck, J. Canon, A. Chen, D. Chow, J. Duquette J. Eksterowicz, B. M. Fox, J. Fu, X. Huang, J. Houze, L. Jin, Y. Li, Y. Ling, M. C. Lo, A. M. Long, L. R. Mcgee, J. Mcintosh, J. D. Oliner, T. Osgood, Y. Rew, A. Y. Saiki, P. Shaffer, S. Wortman, P. Yakowec, X. Yan, Q. Ye, D. Yu, X. Zhao, J. Zhou, S. H. Olson, D. Sun, J. C. Medina
Novel Inhibitors Of The Mdm2-P53 Interaction Featuring Hydrogen Bond Acceptors As Carboxylic Acid Isosteres.
J. Med. Chem. V. 57 2963 2014
PubMed-ID: 24601644 | Reference-DOI: 10.1021/JM401911V

Compounds

Molecule 1 - E3 UBIQUITIN-PROTEIN LIGASE MDM2
	Chains	:	A
	EC Number	:	6.3.2.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	UNP RESIDUES 6-110
	Gene	:	MDM2
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	DOUBLE MINUTE 2 PROTEIN, HDM2, ONCOPROTEIN MDM2, P53-BINDING PROTEIN MDM2

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 3)

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	VAL A:14 , THR A:15 , THR A:16 , GLN A:18 , LEU A:54 , ILE A:61 , MET A:62 , VAL A:93 , LYS A:94 , HIS A:96 , ILE A:99 , VAL A:109 , VAL A:110 , HOH A:307 , HOH A:310 , HOH A:323 , HOH A:348 , HOH A:379 , HOH A:400 , HOH A:412 , HOH A:448	BINDING SITE FOR RESIDUE 2U5 A 201
2	AC2	SOFTWARE	ARG A:29 , GLN A:71 , HIS A:73 , HOH A:311 , HOH A:373 , HOH A:397	BINDING SITE FOR RESIDUE SO4 A 202
3	AC3	SOFTWARE	PRO A:20 , ALA A:21 , HOH A:304 , HOH A:351 , HOH A:411 , HOH A:433	BINDING SITE FOR RESIDUE SO4 A 203

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:100
                                                                                                                                    
               SCOP domains d4ogna_ A: MDM2                                                                                      SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhh.eeeehhhhhhhhhhh......eehhhhhhhhhhhhhhh.........eee...hhhhhhhh..eee..hhhhhhhhhhh.eee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 4ogn A  11 DGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVV 110
                                    20        30        40        50        60        70        80        90       100       110

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (83, 83)

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Description