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(-) Description

Title :  STRUCTURAL INSIGHTS OF MAT ENZYMES: MATA2B COMPLEXED WITH SAM AND PPNP
 
Authors :  B. Murray, S. V. Antonyuk, A. Marina, S. C. Lu, J. M. Mato, S. S. Hasnain, A
Date :  27 Oct 13  (Deposition) - 16 Jul 14  (Release) - 24 Sep 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.34
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  S-Adenosylmethionine (Same) Synthesis, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Murray, S. V. Antonyuk, A. Marina, S. M. Van Liempd, S. C. Lu, J. M. Mato, S. S. Hasnain, A. L. Rojas
Structure And Function Study Of The Complex That Synthesize S-Adenosylmethionine.
Iucrj V. 1 240 2014
PubMed-ID: 25075345  |  Reference-DOI: 10.1107/S2052252514012585

(-) Compounds

Molecule 1 - S-ADENOSYLMETHIONINE SYNTHASE ISOFORM TYPE-2
    Chains: A, B, C, D
    EC Number: 2.5.1.6
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MAT2A, AMS2, MATA2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ADOMET SYNTHASE 2, METHIONINE ADENOSYLTRANSFERASE 2, MAT 2, METHIONINE ADENOSYLTRANSFERASE II, MAT-II
 
Molecule 2 - METHIONINE ADENOSYLTRANSFERASE 2 SUBUNIT BETA
    Chains: E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MAT2B, TGR, MSTP045, NBLA02999, UNQ2435/PRO4995
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: METHIONINE ADENOSYLTRANSFERASE II BETA, MAT II BETA, PUTATIVE DTDP-4-KETO-6-DEOXY-D-GLUCOSE 4-REDUCTASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 25)

Asymmetric/Biological Unit (4, 25)
No.NameCountTypeFull Name
1EDO17Ligand/Ion1,2-ETHANEDIOL
2MG4Ligand/IonMAGNESIUM ION
3PPK2Ligand/Ion(DIPHOSPHONO)AMINOPHOSPHONIC ACID
4SAM2Ligand/IonS-ADENOSYLMETHIONINE

(-) Sites  (25, 25)

Asymmetric Unit (25, 25)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:31 , LYS A:265 , MG A:402 , PPK A:406 , HOH A:529 , HOH A:600BINDING SITE FOR RESIDUE MG A 401
02AC2SOFTWAREMG A:401 , PPK A:406 , LYS B:285 , HOH B:595BINDING SITE FOR RESIDUE MG A 402
03AC3SOFTWAREALA A:162 , ALA A:165 , GLU A:166 , ARG A:169BINDING SITE FOR RESIDUE EDO A 403
04AC4SOFTWAREGLN A:36 , GLN A:372 , ARG A:373 , ARG A:382 , HOH A:531BINDING SITE FOR RESIDUE EDO A 404
05AC5SOFTWAREGLY A:69 , GLU A:70 , ALA A:109 , GLU A:111 , LYS B:61 , THR B:62 , GLY B:257 , ASP B:258 , ALA B:259BINDING SITE FOR RESIDUE EDO A 405
06AC6SOFTWAREGLU A:23 , HIS A:29 , ASP A:31 , LYS A:181 , ARG A:264 , LYS A:265 , MG A:401 , MG A:402 , SAM A:407 , HOH A:600 , ASP B:134 , GLY B:280 , ALA B:281 , LYS B:285 , ASP B:291 , HOH B:585BINDING SITE FOR RESIDUE PPK A 406
07AC7SOFTWAREHIS A:29 , PRO A:30 , ASP A:179 , LYS A:181 , SER A:247 , ARG A:249 , PHE A:250 , ASP A:258 , PPK A:406 , HOH A:503 , HOH A:505 , ALA B:55 , GLU B:70 , GLN B:113 , ASP B:116 , ILE B:117 , ASP B:134 , LYS B:289 , HOH B:504 , HOH B:509BINDING SITE FOR RESIDUE SAM A 407
08AC8SOFTWARELYS A:61 , GLN A:256 , GLU B:111 , GLN B:112 , PRO B:115BINDING SITE FOR RESIDUE EDO B 401
09AC9SOFTWAREHOH D:523BINDING SITE FOR RESIDUE EDO B 402
10BC1SOFTWAREASP B:191 , ARG B:192 , ARG B:312 , THR B:337BINDING SITE FOR RESIDUE EDO B 403
11BC2SOFTWAREHIS B:326 , ASP B:354BINDING SITE FOR RESIDUE EDO B 404
12BC3SOFTWARETHR A:17 , SER B:331 , ILE B:332 , ARG B:343 , LEU B:346 , HOH B:529 , HOH B:549BINDING SITE FOR RESIDUE EDO B 405
13BC4SOFTWAREASP C:31 , ARG C:264 , PPK C:404 , HOH C:507 , HOH C:552 , MG D:401BINDING SITE FOR RESIDUE MG C 401
14BC5SOFTWAREPHE C:139 , THR C:270 , HIS C:277 , GLY C:278BINDING SITE FOR RESIDUE EDO C 402
15BC6SOFTWARELEU C:328 , SER C:329 , ILE C:330 , HOH C:534 , HOH C:591BINDING SITE FOR RESIDUE EDO C 403
16BC7SOFTWAREGLU C:23 , HIS C:29 , ASP C:31 , LYS C:181 , ARG C:264 , LYS C:265 , MG C:401 , SAM C:405 , HOH C:502 , HOH C:552 , HOH C:567 , HOH C:579 , ASP D:134 , GLY D:280 , ALA D:281 , LYS D:285 , ASP D:291 , MG D:401BINDING SITE FOR RESIDUE PPK C 404
17BC8SOFTWAREHIS C:29 , PRO C:30 , ASP C:179 , LYS C:181 , SER C:247 , ARG C:249 , PHE C:250 , ASP C:258 , PPK C:404 , HOH C:504 , HOH C:558 , ALA D:55 , GLU D:70 , GLN D:113 , ASP D:116 , ILE D:117 , ASP D:134 , LYS D:289 , HOH D:528 , HOH D:574BINDING SITE FOR RESIDUE SAM C 405
18BC9SOFTWAREMG C:401 , PPK C:404 , HOH C:567BINDING SITE FOR RESIDUE MG D 401
19CC1SOFTWARETYR D:242 , HIS D:243 , LEU D:244BINDING SITE FOR RESIDUE EDO D 402
20CC2SOFTWAREGLN D:36 , HIS D:89 , GLN D:372 , ARG D:373 , HOH D:564BINDING SITE FOR RESIDUE EDO D 403
21CC3SOFTWAREASP B:78 , GLN B:80 , ILE D:71 , TYR D:79 , LEU D:110BINDING SITE FOR RESIDUE EDO D 404
22CC4SOFTWAREVAL D:82 , GLU D:85 , ALA D:86 , GLN D:372BINDING SITE FOR RESIDUE EDO D 405
23CC5SOFTWAREARG D:192 , ARG D:312 , GLY D:336 , THR D:337BINDING SITE FOR RESIDUE EDO D 406
24CC6SOFTWARELYS D:228 , ALA D:229 , PRO D:232BINDING SITE FOR RESIDUE EDO D 407
25CC7SOFTWAREGLY E:241 , ASN E:242 , GLN E:283 , LEU E:284 , ARG E:297 , HOH E:508 , HOH E:533BINDING SITE FOR RESIDUE EDO E 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4NDN)

(-) Cis Peptide Bonds  (7, 7)

Asymmetric/Biological Unit
No.Residues
1Gln D:256 -Gly D:257
2Arg E:53 -Pro E:54
3Pro E:134 -Pro E:135
4Arg F:53 -Pro F:54
5Ser F:99 -Gln F:100
6Val F:103 -Asp F:104
7Pro F:134 -Pro F:135

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NDN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4NDN)

(-) Exons   (0, 0)

(no "Exon" information available for 4NDN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:362
                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh.eehhhhee....eeee..eee....eeeeeee.......hhhhhhhhhhhhhhhhhhhhh....eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhh....eeee........hhhhhh.ee...........................hhhhhhhhhhhhhhhhhhhh....eeeeeee.........eeeee.......hhhhhhhhhhhhh..hhhhhhhhh......hhhhhh........hhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ndn A  15 EGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 395
                                    24        34        44        54        64        74        84        94       104       114||     143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393  
                                                                                                                              115|                                                                                                                                                                                                                                                                    
                                                                                                                               135                                                                                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:383
                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh.eehhhhee....eeeeeee..hhhhhhhhh...hhhhh.....eeeeeeee.......hhhhhhhhhhhhhhhhhhhh.....eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhh....eeee..............eee...........................hhhhhhhhhhhhhhhhhhhh....eeeeeeee........eeeee.......hhhhhhhhhhhhh..hhhhhhhhh......hhhhhh........hhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ndn B  13 IEEGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 395
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392   


Chain C from PDB  Type:PROTEIN  Length:360
                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh.eehhhhee....eeeeeeeee.eeeeeeee.......hhhhhhhhhhhhhhhhhhhh.....eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhh....eeee........hhhhhh.ee...hhhhhh..................hhhhhhhhhhhhhhhhhhhh....eeeeeeee........eeeee.......hhhhhhhhhhhhh..hhhhhhhhhh.....hhhhhh........hhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ndn C  15 EGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 395
                                    24        34        44        54        64        74        84        94       104       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395
                                                                                                                            113|                                                                                                                                                                                                                                                                    
                                                                                                                             135                                                                                                                                                                                                                                                                    


Chain D from PDB  Type:PROTEIN  Length:382
                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh.eehhhhee....eeeeeee..hhhhhhhhh...hhhhh.....eeeeeeee.......hhhhhhhhhhhhhhhhhhhh.....eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhh....eeee...............ee...........................hhhhhhhhhhhhhhhhhhhh....eeeeeeee........eeeee.......hhhhhhhhhhhhh..hhhhhhhhhh.....hhhhhh........hhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ndn D  14 EEGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 395
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393  


Chain E from PDB  Type:PROTEIN  Length:309
                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhh...eeeeee........ee....hhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.hhh................hhhhhhhhhhhhhhhhh....eeeee..ee....hhhhh.hhhhhhhhhh....eeee.......eehhhhhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhhh......eeee.....hhhhh.......hhhhhhh......hhhhhhhhhhh..hhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ndn E  15 IPNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLIDKRWRQTVFH 323
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314         


Chain F from PDB  Type:PROTEIN  Length:304
                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhh..eeeeee........ee....hhhhhhhhhhhhh..eeee.................hhhhhhhhhhhhhh.eeeeeee.hhh................hhhhhhhhhhhhhhhhhh...eeeee..ee....hhhhh.hhhhhhhhhh....eeee.......eehhhhhhhhhhhhhhhhhh....eeee.......hhhhhhhhhhhhh......eeee.....hhhhh.......hhhhhhh......hhhhhhhhhhh..hhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ndn F  15 IPNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLIDKRWRQTVFH 323
                                    24        34        44        54        64        74        84     || 99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319    
                                                                                                      90|                                                                                                                                                                                                                                   
                                                                                                       96
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4NDN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NDN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NDN)

(-) Gene Ontology  (18, 24)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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    Protein Cavities: castP
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    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  MAT2B_HUMAN | Q9NZL9
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  METK2_HUMAN | P31153
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MAT2B_HUMAN | Q9NZL9: 2ydx 2ydy 4ktt 4ktv
        METK2_HUMAN | P31153: 2p02 4ktt 4ktv 5a19 5a1g 5a1i 5ugh

(-) Related Entries Specified in the PDB File

4ktt 4ktv