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(-) Description

Title :  CRYSTAL STRUCTURE OF THE PNT DOMAIN OF HUMAN ETS2
 
Authors :  J. A. Newman, C. D. O. Cooper, T. Krojer, L. Shrestha, N. Burgess-Brown, C. H. Arrowsmith, C. Bountra, A. Edwards, O. Gileadi
Date :  30 Aug 13  (Deposition) - 25 Sep 13  (Release) - 29 Jan 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.45
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Pnt (Pointed) Domain, Transcription, Transcription Factor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. A. Newman, C. D. O. Cooper, T. Krojer, L. Shrestha, N. Burgess-Brown C. H. Arrowsmith, C. Bountra, A. Edwards, O. Gileadi
Crystal Structure Of The Pnt Domain Of Human Ets2
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTEIN C-ETS-2
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: PNT DOMAIN (UNP RESIDUES 76-170)
    Gene: ETS2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 6)

Asymmetric Unit (3, 6)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2CA1Ligand/IonCALCIUM ION
3GOL3Ligand/IonGLYCEROL
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CA-1Ligand/IonCALCIUM ION
3GOL1Ligand/IonGLYCEROL
Biological Unit 2 (2, 3)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CA-1Ligand/IonCALCIUM ION
3GOL2Ligand/IonGLYCEROL

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:167 , ASN A:170 , HOH A:302 , HOH A:303 , ILE B:167 , ASN B:170BINDING SITE FOR RESIDUE CA A 201
2AC2SOFTWARESER A:123 , ASP A:153 , PHE A:154 , ASP A:157BINDING SITE FOR RESIDUE GOL A 202
3AC3SOFTWAREVAL A:127 , VAL B:127BINDING SITE FOR RESIDUE ACT A 203
4AC4SOFTWAREGLU A:149 , GLU B:108 , GLY B:133BINDING SITE FOR RESIDUE GOL B 201
5AC5SOFTWAREARG A:96 , GLU B:93 , TRP B:117 , ASN B:120 , ACT B:203BINDING SITE FOR RESIDUE GOL B 202
6AC6SOFTWAREGLU A:93 , ARG A:96 , TRP A:117 , ARG B:96 , GOL B:202BINDING SITE FOR RESIDUE ACT B 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MHV)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4MHV)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MHV)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MHV)

(-) Exons   (0, 0)

(no "Exon" information available for 4MHV)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:94
                                                                                                                              
               SCOP domains d4mhva_ A: automated matches                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh.....hhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                 4mhv A  77 AVMSQALKATFSGFKKEQRRLGIPKNPWLWSEQQVCQWLLWATNEFSLVNVNLQRFGMNGQMLCNLGKERFLELAPDFVGDILWEHLEQMIKEN 170
                                    86        96       106       116       126       136       146       156       166    


Chain B from PDB  Type:PROTEIN  Length:96
                                                                                                                                
               SCOP domains d4mhvb_ B: automated matches                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh.....hhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------ Transcript
                 4mhv B  75 MKAVMSQALKATFSGFKKEQRRLGIPKNPWLWSEQQVCQWLLWATNEFSLVNVNLQRFGMNGQMLCNLGKERFLELAPDFVGDILWEHLEQMIKEN 170
                                    84        94       104       114       124       134       144       154       164
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MHV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MHV)

(-) Gene Ontology  (22, 22)

Asymmetric Unit(hide GO term definitions)

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  4mhv
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  ETS2_HUMAN | P15036
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 Related Entries

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        ETS2_HUMAN | P15036: 4bqa

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