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(-) Description

Title :  RAT PKC C2 DOMAIN BOUND TO CD
 
Authors :  K. M. Morales, Y. Yang, Z. Long, P. Li, A. B. Taylor, P. J. Hart, T. I. Igume
Date :  03 Jun 13  (Deposition) - 28 Aug 13  (Release) - 23 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein Kinase Pkc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. A. Morales, Y. Yang, Z. Long, P. Li, A. B. Taylor, P. J. Hart, T. I. Igumenova
Cd(2+) As A Ca(2+) Surrogate In Protein-Membrane Interactions: Isostructural But Not Isofunctional.
J. Am. Chem. Soc. V. 135 12980 2013
PubMed-ID: 23937054  |  Reference-DOI: 10.1021/JA406958K

(-) Compounds

Molecule 1 - PROTEIN KINASE C ALPHA TYPE
    Chains: A
    EC Number: 2.7.11.13
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-SUMO
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 155-293
    Gene: PKCA, PRKCA
    Organism Common: RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: PKC-A, PKC-ALPHA

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 11)

Asymmetric/Biological Unit (2, 11)
No.NameCountTypeFull Name
1CD6Ligand/IonCADMIUM ION
2SO45Ligand/IonSULFATE ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:239 , PHE A:261 , GLY A:262 , GLU A:265 , ASN A:287 , HOH A:426 , HOH A:435 , HOH A:534BINDING SITE FOR RESIDUE SO4 A 301
02AC2SOFTWARELYS A:181 , LYS A:197 , LYS A:199 , ASN A:206 , LYS A:209 , GLN A:222 , HOH A:468 , HOH A:508BINDING SITE FOR RESIDUE SO4 A 302
03AC3SOFTWARETYR A:195 , LYS A:197 , LYS A:209 , LYS A:211 , HOH A:459 , HOH A:499BINDING SITE FOR RESIDUE SO4 A 303
04AC4SOFTWARELYS A:172 , LYS A:230 , ARG A:252 , ASN A:253 , HOH A:451 , HOH A:527BINDING SITE FOR RESIDUE SO4 A 304
05AC5SOFTWAREASP A:187 , ARG A:249 , THR A:250 , THR A:251 , HOH A:410 , HOH A:443 , HOH A:445BINDING SITE FOR RESIDUE SO4 A 305
06AC6SOFTWAREASP A:187 , ASP A:193 , ASP A:246 , TRP A:247 , ASP A:248 , HOH A:410BINDING SITE FOR RESIDUE CD A 306
07AC7SOFTWAREMET A:186 , ASP A:187 , ASP A:246 , ASP A:248 , ASP A:254 , HOH A:443BINDING SITE FOR RESIDUE CD A 307
08AC8SOFTWAREASP A:248 , THR A:251 , ARG A:252 , ASP A:254BINDING SITE FOR RESIDUE CD A 308
09AC9SOFTWAREASP A:187 , ASP A:193 , SER A:217 , HOH A:408 , HOH A:419 , HOH A:522BINDING SITE FOR RESIDUE CD A 309
10BC1SOFTWARETHR A:156 , GLU A:157 , ASN A:279 , GLU A:282 , HOH A:540 , HOH A:541BINDING SITE FOR RESIDUE CD A 310
11BC2SOFTWAREGLU A:265 , HOH A:420 , HOH A:501 , HOH A:511BINDING SITE FOR RESIDUE CD A 311

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4L1L)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ile A:201 -Pro A:202

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4L1L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4L1L)

(-) Exons   (0, 0)

(no "Exon" information available for 4L1L)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:138
                                                                                                                                                                          
               SCOP domains d4l1la_ A: C2 domain from protein kinase c (alpha)                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeeeeee..eeeeeeeeee............eeeeeeee........ee..........eeeeeeeee.hhhhhh.eeeeeeee.......eeeeeeeeehhhhhhh.eeeeee..hhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4l1l A 156 TEKRGRIYLKAEVTDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPASGWYKLLNQEEGEYYNVPIPEG 293
                                   165       175       185       195       205       215       225       235       245       255       265       275       285
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4L1L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4L1L)

(-) Gene Ontology  (63, 63)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ile A:201 - Pro A:202   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KPCA_RAT | P05696: 1dsy 2nce 3gpe 3rdj 3twy

(-) Related Entries Specified in the PDB File

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