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(-) Description

Title :  SOLUTION STRUCTURE OF CA2+-BOUND C2 DOMAIN FROM PROTEIN KINASE C ALPHA IN THE FORM OF COMPLEX WITH V5-PHM PEPTIDE
 
Authors :  Y. Yang, T. I. Igumenova
Date :  28 Mar 16  (Deposition) - 29 Mar 17  (Release) - 29 Mar 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Yang, T. I. Igumenova
Ca2+-Sensing Domain Contributes To Auto-Inhibition Of Protein Kinase Calpha Through Interactions With C-Terminal Tail
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTEIN KINASE C ALPHA TYPE
    Chains: A
    EC Number: 2.7.11.13
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET-SUMO
    Fragment: C2 DOMAIN RESIDUES 155-293
    Gene: PRKCA, PKCA
    Organism Common: BROWN RAT,RAT,RATS
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: PKC-A, PKC-ALPHA

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
NMR Structure * (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (2, 2)

NMR Structure (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:187 , ASP A:193 , ASP A:246 , TRP A:247 , ASP A:248 , CA A:302BINDING SITE FOR RESIDUE CA A 301
2AC2SOFTWAREMET A:186 , ASP A:187 , ASP A:246 , ASP A:248 , ASP A:254 , CA A:301BINDING SITE FOR RESIDUE CA A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2NCE)

(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Ile A:201 -Pro A:202

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NCE)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1C2PS50004 C2 domain profile.KPCA_RAT172-260  1A:172-260
NMR Structure * (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1C2PS50004 C2 domain profile.KPCA_RAT172-260  1A:172-260

(-) Exons   (0, 0)

(no "Exon" information available for 2NCE)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:139
                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeee....eeeeeeeee............eeeeeeee........ee..........eeeeeee...hhhhhh.eeeeeeee.......eeeeeeeeehhhhhhh.eeeeee....hhhhh...ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nce A 155 HTEKRGRIYLKAEVTDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPASGWYKLLNQEEGEYYNVPIPEG 293
                                   164       174       184       194       204       214       224       234       244       254       264       274       284
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2NCE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2NCE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2NCE)

(-) Gene Ontology  (63, 63)

NMR Structure(hide GO term definitions)

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  2nce
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  KPCA_RAT | P05696
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KPCA_RAT | P05696: 1dsy 3gpe 3rdj 3twy 4l1l

(-) Related Entries Specified in the PDB File

2ncf