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(-) Description

Title :  CRYSTAL STRUCTURE OF RRP9 WD40 REPEATS
 
Authors :  X. Wu, W. Tempel, C. Xu, M. El Bakkouri, H. He, A. Seitova, Y. Li, C. Bount C. H. Arrowsmith, A. M. Edwards, J. Min, Structural Genomics Consor (Sgc)
Date :  28 Mar 13  (Deposition) - 17 Apr 13  (Release) - 10 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.92
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics Consortium, Sgc, Ribosome, Rna Processing, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Wu, W. Tempel, C. Xu, M. El Bakkouri, H. He, A. Seitova, Y. Li, C. Bountra, C. H. Arrowsmith, A. M. Edwards, J. Min, Structural Genomics Consortium (Sgc)
Crystal Structure Of Rrp9 Wd40 Repeats
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - U3 SMALL NUCLEOLAR RNA-INTERACTING PROTEIN 2
    Chains: A
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: PFBOH-MHL
    Expression System Strain: SF9
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: WD40 REPEATS (UNP RESIDUES 118-470)
    Gene: RRP9, RNU3IP2, U355K
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: RRP9 HOMOLOG, U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN- ASSOCIATED 55 KDA PROTEIN, U3 SNORNP-ASSOCIATED 55 KDA PROTEIN, U3- 55K

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 9)

Asymmetric/Biological Unit (1, 9)
No.NameCountTypeFull Name
1UNX9Ligand/IonUNKNOWN ATOM OR ION

(-) Sites  (0, 0)

(no "Site" information available for 4JXM)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JXM)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JXM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JXM)

(-) Exons   (0, 0)

(no "Exon" information available for 4JXM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:330
                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.....eeeee...........eeeeee.....eeeeee....eeeee.....eeeee......eeeeee.....eeeeee...eeeeee.hhheeeeeee.......eeee....eeeee.hhh.eeeeee....eeeeee.....eeeeeeee..eeeeee....eeeee.......eee.....ee......ee....eeee.....eeeee....eeeeeee.hhhh.eeeeeeee...eeeeeee.....eeeeeee................eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4jxm A 130 EIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465
                                   139       149       159       169       179       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465
                                                                                   187|                                                                                                                                                                                                                                                                               
                                                                                    194
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4JXM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JXM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JXM)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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        U3IP2_HUMAN | O43818: 4j0w

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