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(-) Description

Title :  CRYSTAL STRUCTURE OF RIBOSOMAL-PROTEIN-ALANINE N-ACETYLTRANSFERASE FROM BRUCELLA MELITENSIS IN COMPLEX WITH ACETYL COA
 
Authors :  Ssgcid, Seattle Structural Genomics Center For Infectious Dis (Ssgcid)
Date :  27 Mar 13  (Deposition) - 01 May 13  (Release) - 01 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Ssgcid, Ribosomal-Protein-Alanine N-Acetyltransferase, Acetyl Coa, Coenzyme A, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Seattle Structural Genomics Center For Infectious Disease (Ssgcid), J. Abendroth, T. Arakaki, D. Lorimer, T. E. Edwards
Crystal Structure Of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis In Complex Wit Acetyl Coa
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GCN5-RELATED N-ACETYLTRANSFERASE
    Chains: A, B
    EC Number: 2.3.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: BAB1_1664
    Organism Scientific: BRUCELLA ABORTUS
    Organism Taxid: 359391
    Strain: 2308

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 6)

Asymmetric/Biological Unit (3, 6)
No.NameCountTypeFull Name
1ACO1Ligand/IonACETYL COENZYME *A
2CA4Ligand/IonCALCIUM ION
3CL1Ligand/IonCHLORIDE ION

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:29 , VAL A:87 , TYR A:88 , VAL A:89 , ARG A:94 , GLY A:95 , GLY A:96 , GLY A:97 , ILE A:98 , GLY A:99 , ARG A:100 , GLY A:121 , ILE A:122 , ASN A:126 , ALA A:128 , SER A:129 , ALA A:131 , HIS A:133 , SER A:135 , HOH A:305 , HOH A:340 , HOH A:352 , HOH A:379 , HOH A:383 , HOH A:389 , HOH A:390 , HOH A:391 , HOH A:392 , HOH A:408 , HOH A:410 , HOH A:413 , HOH A:414 , HOH A:454 , ASN B:21 , GLU B:25 , LEU B:35 , HOH B:319 , HOH B:358BINDING SITE FOR RESIDUE ACO A 201
2AC2SOFTWAREASP A:37 , HOH A:310 , HOH A:426 , HOH A:444 , GLU B:109 , GLU B:112BINDING SITE FOR RESIDUE CA A 202
3AC3SOFTWAREGLU A:109 , GLU A:112 , HOH A:325 , HOH A:335 , HOH A:369 , GLY B:125BINDING SITE FOR RESIDUE CA A 203
4AC4SOFTWAREARG B:74BINDING SITE FOR RESIDUE CL A 204
5AC5SOFTWAREGLY A:95 , HOH A:391 , HOH A:415 , GLU B:25 , HOH B:334 , HOH B:384BINDING SITE FOR RESIDUE CA B 201
6AC6SOFTWAREGLY B:121 , HOH B:308 , HOH B:398 , HOH B:432 , HOH B:433BINDING SITE FOR RESIDUE CA B 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JWP)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JWP)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JWP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JWP)

(-) Exons   (0, 0)

(no "Exon" information available for 4JWP)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:165
                                                                                                                                                                                                     
               SCOP domains d4jwpa_ A: automated matches                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh...eeeeee..eeeeeeeeee...hhhhh.eeeeeeee.......hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jwp A   0 SMTLLIRHATEADLPALLAIYNDAVENTLAIWNETLVDLENRHQWLENRNRDGFPVLVAEREGQVVGYASYGPFRPFEGFRHSSELSVYVASNARGGGIGRTLLAELIEEARERKVHVLIAGIEAGNAASIALHRSQGFEECGTLKQVGQKFGRWLDLLFMQKIL 164
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159     


Chain B from PDB  Type:PROTEIN  Length:163
                                                                                                                                                                                                   
               SCOP domains d4jwpb_ B: automated matches                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeeee..eeeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh...eeeeeeeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jwp B   2 TLLIRHATEADLPALLAIYNDAVENTLAIWNETLVDLENRHQWLENRNRDGFPVLVAEREGQVVGYASYGPFRPFEGFRHSSELSVYVASNARGGGIGRTLLAELIEEARERKVHVLIAGIEAGNAASIALHRSQGFEECGTLKQVGQKFGRWLDLLFMQKIL 164
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JWP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JWP)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q2YRK4_BRUA2 | Q2YRK4: 4j3g

(-) Related Entries Specified in the PDB File

4j3g NATIVE STRUCTURE RELATED ID: BRABA.17352.A RELATED DB: TARGETTRACK