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(-) Description

Title :  CRYSTAL STRUCTURE OF THE N114A ABL-SH3 DOMAIN MUTANT AT PH4
 
Authors :  A. Camara-Artigas, J. M. Martin-Garcia
Date :  07 Mar 13  (Deposition) - 12 Mar 14  (Release) - 12 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Beta Shandwich, Sh3 Domain, Kinase, Poly Proline Rich Motifs, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Camara-Artigas, J. M. Martin-Garcia
Crystal Structure Of The Abl-Sh3 Domain At Ph5
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - TYROSINE-PROTEIN KINASE ABL1
    ChainsA
    EC Number2.7.10.2
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET15B
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentSH3 DOMAIN, UNP RESIDUES 60-121
    GeneABL, ABL1, JTK7
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL1, ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1, ABELSON TYROSINE-PROTEIN KINASE 1, PROTO-ONCOGENE C-ABL, P150

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1NA2Ligand/IonSODIUM ION
2PEG1Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMET A:59 , TRP A:110 , ALA A:114BINDING SITE FOR RESIDUE PEG A 201
2AC2SOFTWARESER A:113 , ILE A:116 , SER A:121 , HOH A:305 , HOH A:307BINDING SITE FOR RESIDUE NA A 202
3AC3SOFTWARETHR A:117 , PRO A:118 , HOH A:328BINDING SITE FOR RESIDUE NA A 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JJD)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JJD)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:59
                                                                                           
               SCOP domains d4jjda_ A: automated matches                                SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee..............eeeeeee.....eeeeee..eeeeee...eee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                 4jjd A  59 MENDPNLFVALYDFVATLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVNS 121
                                    68     || 82        92       102       112         
                                          74|                                          
                                           79                                          

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JJD)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (125, 125)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ABL1_HUMAN | P005191ab2 1abl 1awo 1bbz 1ju5 1opl 1zzp 2abl 2e2b 2f4j 2fo0 2g1t 2g2f 2g2h 2g2i 2gqg 2hiw 2hyy 2hz0 2hz4 2hzi 2o88 2v7a 3cs9 3eg0 3eg1 3eg2 3eg3 3egu 3k2m 3pyy 3qri 3qrj 3qrk 3t04 3ue4 3uyo 4j9b 4j9c 4j9d 4j9e 4j9f 4j9g 4j9h 4j9i 4jjb 4jjc 4twp 4wa9 4xey 4yc8 4zog 5dc0 5dc4 5dc9 5hu9 5mo4 5oaz

(-) Related Entries Specified in the PDB File

1abq CRYSTAL STRUCTURE OF THE UNLIGANDED ABL TYROSINE KINASE SH3 DOMAIN
3eg0 CRYSTAL STRUCTURE OF THE N114T MUTANT OF ABL-SH3 DOMAIN PH 3
3eg2 CRYSTAL STRUCTURE OF THE N114Q MUTANT OF ABL-SH3 DOMAIN
3egu CRYSTAL STRUCTURE OF THE N114A MUTANT OF ABL-SH3 DOMAIN PH7
4jjb
4jjc