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(-) Description

Title :  N10-FORMYLTETRAHYDROFOLATE SYNTHETASE FROM MOORELLA THERMOACETICA WITH SULFATE
 
Authors :  B. Stec
Date :  08 Jan 13  (Deposition) - 10 Apr 13  (Release) - 12 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Biol. Unit 2:  A,B  (2x)
Keywords :  Alpha/Beta, Enzyme, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Stec
Time Passes Yet Errors Remain: Comments On The Structure Of N(10) -Formyltetrahydrofolate Synthetase.
Protein Sci. V. 22 671 2013
PubMed-ID: 23533144  |  Reference-DOI: 10.1002/PRO.2252

(-) Compounds

Molecule 1 - FORMATE--TETRAHYDROFOLATE LIGASE
    Chains: A, B
    EC Number: 6.3.4.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FHS, MOTH_0109
    Organism Scientific: MOORELLA THERMOACETICA
    Organism Taxid: 264732
    Strain: ATCC 39073
    Synonym: FORMYLTETRAHYDROFOLATE SYNTHETASE, FHS, FTHFS

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB
Biological Unit 2 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 9)

Asymmetric Unit (2, 9)
No.NameCountTypeFull Name
1SO45Ligand/IonSULFATE ION
2TOE4Ligand/Ion2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL
Biological Unit 1 (2, 18)
No.NameCountTypeFull Name
1SO410Ligand/IonSULFATE ION
2TOE8Ligand/Ion2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL
Biological Unit 2 (2, 18)
No.NameCountTypeFull Name
1SO410Ligand/IonSULFATE ION
2TOE8Ligand/Ion2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:74 , ARG A:97 , GLY A:303 , PHE A:304 , HOH A:912 , HOH A:942BINDING SITE FOR RESIDUE SO4 A 601
2AC2SOFTWAREARG A:175 , ARG A:178 , MET A:533 , GLY A:537 , ALA B:188 , HOH B:778BINDING SITE FOR RESIDUE SO4 A 602
3AC3SOFTWARESER A:446 , LYS A:448 , ARG A:505 , ARG A:507 , HOH A:762 , HOH A:1012BINDING SITE FOR RESIDUE SO4 A 603
4AC4SOFTWAREARG A:162 , ILE A:164 , GLU A:194 , HOH A:917BINDING SITE FOR RESIDUE TOE A 604
5AC5SOFTWARELEU A:480 , GLY A:481 , TYR A:482BINDING SITE FOR RESIDUE TOE A 605
6AC6SOFTWAREALA A:188 , ARG B:175 , ARG B:178 , MET B:533 , GLY B:537BINDING SITE FOR RESIDUE SO4 B 601
7AC7SOFTWARELYS B:74 , ARG B:97 , GLY B:303 , PHE B:304BINDING SITE FOR RESIDUE SO4 B 602
8AC8SOFTWAREARG B:162 , ILE B:164 , ASN B:179 , HOH B:759BINDING SITE FOR RESIDUE TOE B 603
9AC9SOFTWAREARG B:91 , ARG B:224 , TYR B:482BINDING SITE FOR RESIDUE TOE B 604

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4IOJ)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Val A:120 -Pro A:121
2Val B:120 -Pro B:121

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IOJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IOJ)

(-) Exons   (0, 0)

(no "Exon" information available for 4IOJ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:557
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains d4ioja_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh....hhhhhhhhh..hhh.eee.....eeehhhhhhhh......eeeeeee........hhhhhhhhhhhhhhhh...eeeee....hhhhhh.....eee..eeeehhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eee...hhhhh.eee...hhhhh..eee.eee...hhhhhhhhhh.hhhhhhhhhhhheeee.....eee.hhhhhhhhhhhhh......eeeee....eeee.............hhhhhhhhhhhh.eeeee......hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh..hhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeee.....hhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh.....eeehhhhhhhhhhhhhh..............................eee.eeeee....eeeee.............hhhhhhee.....ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ioj A   3 KVPSDIEIAQAAKMKPVMELARGLGIQEDEVELYGKYKAKISLDVYRRLKDKPDGKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMVCLREPSLGPSFGIKGGAAGGGYAQVVPMEDINLHFTGDIHAVTYAHNLLAAMVDNHLQQGNVLNIDPRTITWRRVIDLNDRALRNIVIGLGGKANGVPRETGFDISVASEVMACLCLASDLMDLKERFSRIVVGYTYDGKPVTAGDLEAQGSMALLMKDAIKPNLVQTLENTPAFIHGGPFANIAHGCNSIIATKTALKLADYVVTEAGFGADLGAEKFYDVKCRYAGFKPDATVIVATVRALKMHGGVPKSDLATENLEALREGFANLEKHIENIGKFGVPAVVAINAFPTDTEAELNLLYELCAKAGAEVALSEVWAKGGEGGLELARKVLQTLESRPSNFHVLYNLDLSIKDKIAKIATEIYGADGVNYTAEADKAIQRYESLGYGNLPVVMAKTQYSFSDDMTKLGRPRNFTITVREVRLSAGAGFIVPITGAIMTMPGLPKRPAACNIDIDADGVITGLF 559
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       


Chain B from PDB  Type:PROTEIN  Length:557
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains d4iojb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhh...hhhhhhhh...hhh.eeee...eeee.hhhhhhh......eeeeeee........hhhhhhhhhhhhhhhh...eeeee....hhhhhh.....eee..eeeehhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eee...hhhhh.eee..........eee.eee...hhhhhhhhhh.hhhhhhhhhhhheeee.....eee.....hhhhhhhhh......eeeee....eeee.............hhhhhhhhhhhh.eeeee......hhhhhhhhhhhhhhh....eeeeeeehhhhhhhh..hhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeee.....hhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhh.............................eee.eeeee....eeeee.............hhhhh.ee.....ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ioj B   3 KVPSDIEIAQAAKMKPVMELARGLGIQEDEVELYGKYKAKISLDVYRRLKDKPDGKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMVCLREPSLGPSFGIKGGAAGGGYAQVVPMEDINLHFTGDIHAVTYAHNLLAAMVDNHLQQGNVLNIDPRTITWRRVIDLNDRALRNIVIGLGGKANGVPRETGFDISVASEVMACLCLASDLMDLKERFSRIVVGYTYDGKPVTAGDLEAQGSMALLMKDAIKPNLVQTLENTPAFIHGGPFANIAHGCNSIIATKTALKLADYVVTEAGFGADLGAEKFYDVKCRYAGFKPDATVIVATVRALKMHGGVPKSDLATENLEALREGFANLEKHIENIGKFGVPAVVAINAFPTDTEAELNLLYELCAKAGAEVALSEVWAKGGEGGLELARKVLQTLESRPSNFHVLYNLDLSIKDKIAKIATEIYGADGVNYTAEADKAIQRYESLGYGNLPVVMAKTQYSFSDDMTKLGRPRNFTITVREVRLSAGAGFIVPITGAIMTMPGLPKRPAACNIDIDADGVITGLF 559
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IOJ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IOJ)

(-) Gene Ontology  (7, 7)

Asymmetric Unit(hide GO term definitions)

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        FTHS_MOOTA | Q2RM91: 4iok 4iol 4iom 4jim 4jjk 4jjz 4jki

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3pzx