4HZD - JenaLib

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Title :   CRYSTAL STRUCTURE OF SERINE ACETYLTRANSFERASE IN COMPLEX WITH COENZYME A FROM BRUCELLA ABORTUS STRAIN S19

Authors :   S. Kumar, G. Samudrala

Date :   15 Nov 12 (Deposition) - 19 Feb 14 (Release) - 13 Aug 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.87

Chains :   Asym. Unit : A,B
Biol. Unit 1: A,B  (3x)

Keywords :   Left Handed Beta-Helical (Lbh) Domain, Cysteine Biosynthesis, Serine Acetyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Kumar, N. Kumar, N. Alam, S. Gourinath
Crystal Structure Of Serine Acetyl Transferase From Brucell Abortus And Its Complex With Coenzyme A.
Biochim. Biophys. Acta V. 1844 1741 2014
PubMed-ID: 25058332 | Reference-DOI: 10.1016/J.BBAPAP.2014.07.009

Molecule 1 - CYSE, SERINE ACETYLTRANSFERASE
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET21
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	BABS19_I11940, CYSE
	Organism Scientific	:	BRUCELLA ABORTUS
	Organism Taxid	:	430066
	Strain	:	S19

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (3x)	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 4)

No.	Name	Count	Type	Full Name
1	15P	1	Ligand/Ion	POLYETHYLENE GLYCOL (N=34)
2	COA	1	Ligand/Ion	COENZYME A
3	MG	2	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (2, 6)

No.	Name	Count	Type	Full Name
1	15P	3	Ligand/Ion	POLYETHYLENE GLYCOL (N=34)
2	COA	3	Ligand/Ion	COENZYME A
3	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HIS A:168 , THR A:191 , GLY A:194 , LYS A:197 , GLY A:213 , ALA A:214 , ALA A:231 , ALA A:232 , VAL A:235 , LEU A:237 , THR A:245 , ALA A:247 , ILE A:254 , MG A:302 , PRO B:250 , ARG B:252	BINDING SITE FOR RESIDUE COA A 301
2	AC2	SOFTWARE	ALA A:232 , GLY A:233 , SER A:234 , ALA A:247 , GLY A:248 , COA A:301	BINDING SITE FOR RESIDUE MG A 302
3	AC3	SOFTWARE	ASP A:71 , HOH B:401 , HOH B:443	BINDING SITE FOR RESIDUE MG A 303
4	AC4	SOFTWARE	THR B:170 , GLY B:171 , GLY B:189 , GLY B:215 , LYS B:217 , HOH B:470	BINDING SITE FOR RESIDUE 15P B 301

Asymmetric Unit

No.	Residues
1	A:227	-	A:259
2	B:227	-	B:259

Asymmetric Unit

No.	Residues
1	Val A:249	-	Pro A:250
2	Val B:249	-	Pro B:250

(no "SAP(SNP)/Variant" information available for 4HZD)

(no "PROSITE Motif" information available for 4HZD)

(no "Exon" information available for 4HZD)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:250
                                                                                                                                                                                                                                                                                          
               SCOP domains d4hzda_ A: automated matches                                                                                                                                                                                                                               SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..ee....ee....ee......ee....ee....ee....eee...........ee....ee....eee...ee....ee....ee.......eeee....eeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hzd A  11 AGLDQVDPIWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQTFDTMLEANPEWSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGETGCT 260
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260

Chain B from PDB  Type:PROTEIN  Length:245
                                                                                                                                                                                                                                                                                     
               SCOP domains d4hzdb_ B: automated matches                                                                                                                                                                                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....ee....ee.....eee....ee....ee....eee...........ee....ee....eee...ee....ee....ee.......eeee....eeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hzd B  16 VDPIWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQTFDTMLEANPEWSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGETGCT 260
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Single-stranded left-handed beta-helix (154)

Superfamily: Trimeric LpxA-like enzymes (147)

Family: automated matches (55)

Protein domain: automated matches (55)

Brucella abortus [TaxId: 430066] (2)

1a	d4hzda_	A:
1b	d4hzdb_	B:

(no "CATH Domain" information available for 4HZD)

(no "Pfam Domain" information available for 4HZD)

Asymmetric Unit(hide GO term definitions)

(no "Gene Ontology" information available for 4HZD)

Asymmetric Unit
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	Ligands, Modified Residues, Ions
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		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Val A:249 - Pro A:250	[ RasMol ]
		Val B:249 - Pro B:250	[ RasMol ]

Biological Unit
	Complete Structure
		Biological Unit 1	[ Jena3D ]

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UniProtKB/TrEMBL
	A0A0F6AR69_B \| A0A0F6AR69	:	4hzc

1ssq	SERINE ACETYLTRANSFERASE- COMPLEX WITH CYSTEINE
1t3d	CRYSTAL STRUCTURE OF SERINE ACETYLTRANSFERASE FROM E.COLI AT 2.2A
3mc4	CRYSTAL STRUCTURE OF WW/RSP5/WWP DOMAIN: BACTERIAL TRANSFERASE HEXAPEPTIDE REPEAT: SERINE O-ACETYLTRANSFERASE FROM BRUCELLA MELITENSIS
3p1b	CRYSTAL STRUCTURE OF THE NATIVE SERINE ACETYLTRANSFERASE 1 FROM ENTAMOEBA HISTOLYTICA
4hzc

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 4)

Sites (4, 4)

SS Bonds (2, 2)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (1, 2)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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