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(-) Description

Title :  PYRROLOPYRIMIDINE INHIBITORS OF DNA GYRASE B AND TOPOISOMERASE IV, PART I: STRUCTURE GUIDED DISCOVERY AND OPTIMIZATION OF DUAL TARGETING AGENTS WITH POTENT, BROAD-SPECTRUM ENZYMATIC ACTIVITY
 
Authors :  D. C. Bensen, C. J. Creighton, L. W. Tari
Date :  14 Nov 12  (Deposition) - 13 Feb 13  (Release) - 27 Feb 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,J
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  G  (1x)
Biol. Unit 8:  H  (1x)
Biol. Unit 9:  J  (1x)
Biol. Unit 10:  A,C,D  (1x)
Biol. Unit 11:  B (1x),G (1x),J (1x)
Biol. Unit 12:  E (1x),F (1x),H (1x)
Keywords :  Atp-Binding, Nucleotide-Binding, Topoisomerase, Atp-Binding Domain, Isomerase-Isomerase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. W. Tari, M. Trzoss, D. C. Bensen, X. Li, Z. Chen, T. Lam, J. Zhang, C. J. Creighton, M. L. Cunningham, B. Kwan, M. Stidham, K. J. Shaw, F. C. Lightstone, S. E. Wong, T. B. Nguyen, J. Nix, J. Finn
Pyrrolopyrimidine Inhibitors Of Dna Gyrase B (Gyrb) And Topoisomerase Iv (Pare). Part I: Structure Guided Discovery And Optimization Of Dual Targeting Agents With Potent, Broad-Spectrum Enzymatic Activity.
Bioorg. Med. Chem. Lett. V. 23 1529 2013
PubMed-ID: 23352267  |  Reference-DOI: 10.1016/J.BMCL.2012.11.032

(-) Compounds

Molecule 1 - DNA TOPOISOMERASE IV, B SUBUNIT
    ChainsA, B, C, D, E, F, G, H, J
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    FragmentUNP RESIDUES 19-225
    GenePARE, EF_1615
    Organism ScientificENTEROCOCCUS FAECALIS
    Organism Taxid226185
    StrainATCC 700802 / V583

 Structural Features

(-) Chains, Units

  123456789
Asymmetric Unit ABCDEFGHJ
Biological Unit 1 (1x)A        
Biological Unit 2 (1x) B       
Biological Unit 3 (1x)  C      
Biological Unit 4 (1x)   D     
Biological Unit 5 (1x)    E    
Biological Unit 6 (1x)     F   
Biological Unit 7 (1x)      G  
Biological Unit 8 (1x)       H 
Biological Unit 9 (1x)        J
Biological Unit 10 (1x)A CD     
Biological Unit 11 (1x) B (1x)    G (1x) J (1x)
Biological Unit 12 (1x)    E (1x)F (1x) H (1x) 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
119Y8Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 5 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 7 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 8 (0, 0)
No.NameCountTypeFull Name
119Y-1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 9 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 10 (1, 3)
No.NameCountTypeFull Name
119Y3Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 11 (0, 0)
No.NameCountTypeFull Name
119Y-1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE
Biological Unit 12 (1, 1)
No.NameCountTypeFull Name
119Y1Ligand/Ion6-ETHYL-4-METHOXY-2-(PYRIDIN-3-YLSULFANYL)-7H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBALDEHYDE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:46 , ASN A:49 , GLU A:53 , VAL A:74 , ASP A:76 , ARG A:79 , GLY A:80 , MET A:81 , PRO A:82 , HIS A:118 , THR A:169 , HOH A:427BINDING SITE FOR RESIDUE 19Y A 301
2AC2SOFTWAREASN B:49 , GLU B:53 , VAL B:74 , ASP B:76 , ARG B:79 , GLY B:80 , MET B:81 , PRO B:82 , THR B:169 , VAL B:171 , HOH B:402BINDING SITE FOR RESIDUE 19Y B 301
3AC3SOFTWAREILE C:46 , ASN C:49 , GLU C:53 , VAL C:74 , ASP C:76 , ARG C:79 , GLY C:80 , MET C:81 , PRO C:82 , HIS C:118 , THR C:169BINDING SITE FOR RESIDUE 19Y C 301
4AC4SOFTWAREILE D:46 , ASN D:49 , GLU D:53 , ASP D:76 , ARG D:79 , GLY D:80 , MET D:81 , GLY D:119 , THR D:169BINDING SITE FOR RESIDUE 19Y D 301
5AC5SOFTWAREILE E:46 , ASN E:49 , GLU E:53 , VAL E:74 , ASP E:76 , ARG E:79 , GLY E:80 , MET E:81 , PRO E:82 , HIS E:118 , THR E:169 , VAL E:171BINDING SITE FOR RESIDUE 19Y E 301
6AC6SOFTWAREASN F:49 , GLU F:53 , ASP F:76 , ARG F:79 , GLY F:80 , MET F:81 , PRO F:82 , THR F:169BINDING SITE FOR RESIDUE 19Y F 301
7AC7SOFTWAREILE G:46 , ASN G:49 , GLU G:53 , VAL G:74 , ASP G:76 , ARG G:79 , GLY G:80 , MET G:81 , PRO G:82 , GLY G:119 , THR G:169BINDING SITE FOR RESIDUE 19Y G 301
8AC8SOFTWAREILE J:46 , ASN J:49 , GLU J:53 , ASP J:76 , ARG J:79 , GLY J:80 , MET J:81 , PRO J:82 , THR J:169 , VAL J:171BINDING SITE FOR RESIDUE 19Y J 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HZ5)

(-) Cis Peptide Bonds  (28, 28)

Asymmetric Unit
No.Residues
1Gly A:57 -Tyr A:58
2Leu A:100 -His A:101
3Arg A:212 -Gly A:213
4Tyr A:223 -Glu A:224
5Gly B:57 -Tyr B:58
6Leu B:100 -His B:101
7Arg B:212 -Gly B:213
8Gly C:57 -Tyr C:58
9Leu C:100 -His C:101
10Arg C:212 -Gly C:213
11Gly D:57 -Tyr D:58
12Leu D:100 -His D:101
13Arg D:212 -Gly D:213
14Gly E:57 -Tyr E:58
15Leu E:100 -His E:101
16Arg E:212 -Gly E:213
17Gly F:57 -Tyr F:58
18Leu F:100 -His F:101
19Arg F:212 -Gly F:213
20Gly G:57 -Tyr G:58
21Leu G:100 -His G:101
22Arg G:212 -Gly G:213
23Tyr G:223 -Glu G:224
24Gly H:57 -Tyr H:58
25Leu H:100 -His H:101
26Arg H:212 -Gly H:213
27Leu J:100 -His J:101
28Arg J:212 -Gly J:213

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HZ5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HZ5)

(-) Exons   (0, 0)

(no "Exon" information available for 4HZ5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                               
               SCOP domains d4hz5a_ A: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh...eeeeee.....eeeee..............hhhhhhhhh.....hhhhhhhheeeeeeeeee..eeeeeeee...eeeeeeeeeee.....eeeeeeee..........hhhhhhhhhhhhhhh....eeeeee......eeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 A  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 225
                                    28        38        48        58        68        78        88        98  ||   124       134       144       154       164       174       184       194       204       214       224 
                                                                                                            101|                                                                                                           
                                                                                                             118                                                                                                           

Chain B from PDB  Type:PROTEIN  Length:190
                                                                                                                                                                                                                              
               SCOP domains d4hz5b_ B: automated matches                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh....eeeeee.....eeeee..............hhhhhhhhh.....hhhhhhhheeeeeeeee...eeeeeeee...eeeeeeeeeee.....eeeeeeee..........hhhhhhhhhhhhhhhh...eeeeee......eeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 B  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYE 224
                                    28        38        48        58        68        78        88        98  ||   124       134       144       154       164       174       184       194       204       214       224
                                                                                                            101|                                                                                                          
                                                                                                             118                                                                                                          

Chain C from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                               
               SCOP domains d4hz5c_ C: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh....eeeeee.....eeeee..............hhhhhhhhh.....hhhhhhhheeeeeeeeee..eeeeeeee...eeeeeeeeeee.....eeeeeeee..........hhhhhhhhhhhhhhhh...eeeeee......eeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 C  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 225
                                    28        38        48        58        68        78        88        98  ||   124       134       144       154       164       174       184       194       204       214       224 
                                                                                                            101|                                                                                                           
                                                                                                             118                                                                                                           

Chain D from PDB  Type:PROTEIN  Length:190
                                                                                                                                                                                                                              
               SCOP domains d4hz5d_ D: automated matches                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh....eeeeee.....eeeee.............hhhhhhh.......hhhhhhhheeeeeeeeee..eeeeeeee...eeeeeeeeeee.....eeeeeeee..........hhhhhhhhhhhhhh.....eeeeee......eeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 D  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHSGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 225
                                    28        38        48        58        68        78       |89        99 ||    125       135       145       155       165       175       185       195       205       215       225
                                                                                              86|          101|                                                                                                           
                                                                                               88           118                                                                                                           

Chain E from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                               
               SCOP domains d4hz5e_ E: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh....eeeeee.....eeeee..............hhhhhhhhh.....hhhhhhhheeeeeeeeee..eeeeeeee...eeeeeeeeeee.....eeeeeeee..........hhhhhhhhhhhhhhhh...eeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 E  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 225
                                    28        38        48        58        68        78        88        98  ||   124       134       144       154       164       174       184       194       204       214       224 
                                                                                                            101|                                                                                                           
                                                                                                             118                                                                                                           

Chain F from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                               
               SCOP domains d4hz5f_ F: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh...eeeeee.....eeeee..............hhhhhhhhh.....hhhhhhhheeeeeeeeee..eeeeeeee...ee....eeeee.....eeeeeeee..........hhhhhhhhhhhhhh.....eeeeee......eeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 F  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 225
                                    28        38        48        58        68        78        88        98  ||   124       134       144       154       164       174       184       194       204       214       224 
                                                                                                            101|                                                                                                           
                                                                                                             118                                                                                                           

Chain G from PDB  Type:PROTEIN  Length:190
                                                                                                                                                                                                                              
               SCOP domains d4hz5g_ G: automated matches                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh....eeeeee.....eeee...............hhhhhhhhh.....hhhhhhhheeeeeeeeee..eeeeeeee...eeeeeeeeeee.....eeeeeeee..........hhhhhhhhhhhhhhh...eeeeeee......eeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 G  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYE 224
                                    28        38        48        58        68        78        88        98  ||   124       134       144       154       164       174       184       194       204       214       224
                                                                                                            101|                                                                                                          
                                                                                                             118                                                                                                          

Chain H from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                               
               SCOP domains d4hz5h_ H: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhh........hhhhhhhhhhhhhhhhhhhhhh....eeeeee.....eeeee..............hhhhhhhhh.....hhhhhhhheeeeeeeeee..eeeeeeee...ee....ee........eeeeeeee..........hhhhhhhhhhhhhhh....eeeeee......eeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 H  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 225
                                    28        38        48        58        68        78        88        98  ||   124       134       144       154       164       174       184       194       204       214       224 
                                                                                                            101|                                                                                                           
                                                                                                             118                                                                                                           

Chain J from PDB  Type:PROTEIN  Length:185
                                                                                                                                                                                                                         
               SCOP domains d4hz5j_ J: automated matches                                                                                                                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh.....eeeeee.....eeee...............hhhhhhhhh....hhhhhhhheeeeeeeee....eeeeee...eeeeeeee.....eeeeeeee.........hhhhhhhhhhhhhhh....eeeeee......eeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hz5 J  19 GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHGVGASVVNALSKWLEVHIVRDGEYMERFEDGGKPVGTLKKIGTKNGTSVTFLPDDTIFTTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 225
                                    28        38        48        58        68        78        88        98  ||   125       135    || 146       156    |||169       179||     190       200       210       220     
                                                                                                            101|                  140|                161|||          180|                                           
                                                                                                             119                   142                 163||           182                                           
                                                                                                                                                        164|                                                         
                                                                                                                                                         167                                                         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 9)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HZ5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HZ5)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)

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Asymmetric Unit
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    Arg G:212 - Gly G:213   [ RasMol ]  
    Arg H:212 - Gly H:213   [ RasMol ]  
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    Gly A:57 - Tyr A:58   [ RasMol ]  
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 Related Entries

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(-) Related Entries Specified in the PDB File

4gee 4gfn 4ggl 4hxw 4hxz 4hy1 4hym 4hyp 4hz0