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(-) Description

Title :  CRYSTAL STRUCTURE OF A PARALLEL 4-HELIX COILED COIL CC-HEX-II
 
Authors :  B. Chi, N. R. Zaccai, R. L. Brady, D. N. Woolfson
Date :  20 Sep 12  (Deposition) - 05 Feb 14  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.33
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  4-Helix Coiled Coil, De Novo Peptide, None, N-Terminal Acetylation, C-Terminal Amidation, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Chi, N. R. Zaccai, R. L. Brady, D. N. Woolfson
Tba
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CC-HEX-II
    Chains: A, B, C, D
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 14)

Asymmetric/Biological Unit (4, 14)
No.NameCountTypeFull Name
1ACE4Mod. Amino AcidACETYL GROUP
2DIO4Ligand/Ion1,4-DIETHYLENE DIOXIDE
3GOL2Ligand/IonGLYCEROL
4NH24Mod. Amino AcidAMINO GROUP

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:28 , ILE B:24 , ALA B:28 , ILE C:24 , ALA C:28BINDING SITE FOR RESIDUE DIO B 101
2AC2SOFTWARETRP A:22 , HOH B:238 , GLU C:2 , ALA C:5 , ILE C:6 , GLU C:9 , HOH C:210BINDING SITE FOR RESIDUE GOL C 101
3AC3SOFTWAREALA A:21 , ILE B:17 , ALA B:21 , ALA C:21 , ALA D:21BINDING SITE FOR RESIDUE DIO C 102
4AC4SOFTWARELYS A:25 , GLN A:29 , ACE C:0 , GLY C:1 , HOH C:222 , TYR D:31 , HOH D:247BINDING SITE FOR RESIDUE GOL D 101
5AC5SOFTWAREILE A:10 , ALA A:14 , ALA B:14 , ILE C:10 , ALA C:14 , ILE D:10 , ALA D:14 , ILE D:17BINDING SITE FOR RESIDUE DIO D 102
6AC6SOFTWAREILE B:3 , ALA B:7 , ALA C:7 , ALA D:7BINDING SITE FOR RESIDUE DIO D 103

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4H7R)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4H7R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H7R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H7R)

(-) Exons   (0, 0)

(no "Exon" information available for 4H7R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:33
                                                                
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                  4h7r A  0 xGEIKAIAQEIKAIAKEIKAIAWEIKAIAQGYx 32
                            |        9        19        29  |
                            |                              32-NH2
                            0-ACE                            


Chain B from PDB  Type:PROTEIN  Length:33
                                                                
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                  4h7r B  0 xGEIKAIAQEIKAIAKEIKAIAWEIKAIAQGYx 32
                            |        9        19        29  |
                            |                              32-NH2
                            0-ACE                            


Chain C from PDB  Type:PROTEIN  Length:33
                                                                
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                  4h7r C  0 xGEIKAIAQEIKAIAKEIKAIAWEIKAIAQGYx 32
                            |        9        19        29  |
                            |                              32-NH2
                            0-ACE                            


Chain D from PDB  Type:PROTEIN  Length:33
                                                                
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                  4h7r D  0 xGEIKAIAQEIKAIAKEIKAIAWEIKAIAQGYx 32
                            |        9        19        29  |
                            |                              32-NH2
                            0-ACE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4H7R)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4H7R)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H7R)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4H7R)

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  4h7r
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 4H7R)

(-) Related Entries Specified in the PDB File

3r3k 3r4a 4h8f 4h8g 4h8l 4h8m 4h8o