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(-) Description

Title :  CRYSTAL STRUCTURE OF A PARALLEL 6-HELIX COILED COIL CC-HEX-IL- 22
 
Authors :  B. Chi, N. R. Zaccai, R. L. Brady, D. N. Woolfson
Date :  22 Sep 12  (Deposition) - 05 Feb 14  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,D,F,H,I,J  (1x)
Biol. Unit 2:  B,C,E,G,K,L  (1x)
Biol. Unit 3:  A (1x),B (1x),C (1x),D (1x),E (1x),F (1x),G (1x),H (1x),I (1x),J (1x),K (1x),L (1x)
Keywords :  Spiral/Offset 6-Straded Coiled Coil, N-Terminal Acetylation, C- Terminal Amidation, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Chi, N. R. Zaccai, R. L. Brady, D. N. Woolfson
Tba
J. Am. Chem. Soc.
PubMed: search

(-) Compounds

Molecule 1 - CC-HEX-IL-22
    Chains: A, B, C, D, E, F, I, J, G, H, K, L
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Other Details: STANDARD F-MOC SOLID PHASE PEPTIDE SYNTHESIS
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): A  D F HIJ  
Biological Unit 2 (1x):  BC E G   KL
Biological Unit 3 (1x): A (1x)B (1x)C (1x)D (1x)E (1x)F (1x)G (1x)H (1x)I (1x)J (1x)K (1x)L (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 12)

Asymmetric Unit (1, 12)
No.NameCountTypeFull Name
1PHI12Mod. Amino AcidIODO-PHENYLALANINE
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1PHI6Mod. Amino AcidIODO-PHENYLALANINE
Biological Unit 2 (1, 6)
No.NameCountTypeFull Name
1PHI6Mod. Amino AcidIODO-PHENYLALANINE
Biological Unit 3 (1, 6)
No.NameCountTypeFull Name
1PHI6Mod. Amino AcidIODO-PHENYLALANINE

(-) Sites  (0, 0)

(no "Site" information available for 4H8G)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4H8G)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4H8G)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H8G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H8G)

(-) Exons   (0, 0)

(no "Exon" information available for 4H8G)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g A  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain B from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g B  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain C from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g C  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain D from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g D  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain E from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g E  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain F from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g F  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain G from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g G  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain H from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g H  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain I from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g I  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain J from PDB  Type:PROTEIN  Length:29
                                                            
               SCOP domains ----------------------------- SCOP domains
               CATH domains ----------------------------- CATH domains
               Pfam domains ----------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------- SAPs(SNPs)
                    PROSITE ----------------------------- PROSITE
                 Transcript ----------------------------- Transcript
                  4h8g J  1 GEIKALAQEIKALAKEIKALAfEIKALAQ 29
                                    10        20 |       
                                                22-PHI   


Chain K from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g K  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI    


Chain L from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4h8g L  1 GEIKALAQEIKALAKEIKALAfEIKALAQG 30
                                    10        20 |      30
                                                22-PHI
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4H8G)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4H8G)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H8G)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4H8G)

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 Related Entries

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(-) Related Entries Specified in the PDB File

3r3k 3r4a 4h7r 4h8f 4h8l 4h8m 4h8o