4GGF - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF MN2+ BOUND CALPROTECTIN

Authors :   S. M. Damo, G. Fritz

Date :   06 Aug 12 (Deposition) - 20 Feb 13 (Release) - 27 Mar 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym. Unit : A,C,K,L,S,T,U,V
Biol. Unit 1: A,C,K,L  (1x)
Biol. Unit 2: S,T,U,V  (1x)

Keywords :   S100, Ef-Hand, Antimicrobial Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. M. Damo, T. E. Kehl-Fie, N. Sugitani, M. E. Holt, S. Rathi, W. J. Murphy, Y. Zhang, C. Betz, L. Hench, G. Fritz, E. P. Skaar, W. J. Chazin
Molecular Basis For Manganese Sequestration By Calprotectin And Roles In The Innate Immune Response To Invading Bacterial Pathogens.
Proc. Natl. Acad. Sci. Usa V. 110 3841 2013
PubMed-ID: 23431180 | Reference-DOI: 10.1073/PNAS.1220341110

Molecule 1 - PROTEIN S100-A8
	Chains	:	A, K, S, U
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET1120
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	S100A8, CAGA, CFAG, MRP8
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	CALGRANULIN-A, CALPROTECTIN L1L SUBUNIT, CYSTIC FIBROSIS ANTIGEN, CFAG, LEUKOCYTE L1 COMPLEX LIGHT CHAIN, MIGRATION INHIBITORY FACTOR-RELATED PROTEIN 8, MRP-8, P8, S100 CALCIUM-BINDING PROTEIN A8, URINARY STONE PROTEIN BAND A

Molecule 2 - PROTEIN S100-A9
	Chains	:	C, L, T, V
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Gene	:	S100A9, CAGB, CFAG, MRP14
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	CALGRANULIN-B, CALPROTECTIN L1H SUBUNIT, LEUKOCYTE L1 COMPLEX HEAVY CHAIN, MIGRATION INHIBITORY FACTOR-RELATED PROTEIN 14, MRP-14, P14, S100 CALCIUM-BINDING PROTEIN A9

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	C	K	L	S	T	U	V
Biological Unit 1 (1x)	:	A	C	K	L
Biological Unit 2 (1x)	:					S	T	U	V

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 28)

No.	Name	Count	Type	Full Name
1	CA	12	Ligand/Ion	CALCIUM ION
2	GOL	6	Ligand/Ion	GLYCEROL
3	MN	7	Ligand/Ion	MANGANESE (II) ION
4	SO4	3	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 4)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	GOL	2	Ligand/Ion	GLYCEROL
3	MN	-1	Ligand/Ion	MANGANESE (II) ION
4	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 5)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	GOL	4	Ligand/Ion	GLYCEROL
3	MN	-1	Ligand/Ion	MANGANESE (II) ION
4	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (28, 28)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:59 , ASN A:61 , ASP A:63 , ALA A:65 , GLU A:70 , HOH A:203	BINDING SITE FOR RESIDUE CA A 101
02	AC2	SOFTWARE	HIS A:17 , HIS A:27 , HIS C:91 , HIS C:95 , HIS C:103 , HIS C:105	BINDING SITE FOR RESIDUE MN C 201
03	AC3	SOFTWARE	HIS A:83 , HIS A:87 , HIS C:20 , ASP C:30 , HOH C:380	BINDING SITE FOR RESIDUE MN C 202
04	AC4	SOFTWARE	ASP C:67 , ASN C:69 , ASP C:71 , GLN C:73 , GLU C:78 , HOH C:305	BINDING SITE FOR RESIDUE CA C 203
05	AC5	SOFTWARE	SER C:23 , LEU C:26 , HIS C:28 , THR C:31 , GLU C:36 , HOH C:327	BINDING SITE FOR RESIDUE CA C 204
06	AC6	SOFTWARE	HIS C:91 , GLU C:92 , HIS C:95 , HOH C:308 , HOH C:349 , HOH C:353 , ASP L:65 , ARG L:85	BINDING SITE FOR RESIDUE GOL C 205
07	AC7	SOFTWARE	LYS K:35 , GLY K:50 , ALA K:51 , ASP K:52 , HOH K:245	BINDING SITE FOR RESIDUE SO4 K 101
08	AC8	SOFTWARE	ASP K:59 , ASN K:61 , ASP K:63 , ALA K:65 , GLU K:70 , HOH K:240	BINDING SITE FOR RESIDUE CA K 102
09	AC9	SOFTWARE	GLU A:57 , ILE A:73 , HOH A:207 , GLU K:57 , ILE K:60 , ILE K:73 , LYS K:77 , HOH K:255	BINDING SITE FOR RESIDUE GOL K 103
10	BC1	SOFTWARE	HIS K:83 , HIS K:87 , HIS L:20 , ASP L:30 , HOH L:357	BINDING SITE FOR RESIDUE MN L 201
11	BC2	SOFTWARE	HIS K:17 , HIS K:27 , HIS L:91 , HIS L:95 , HIS L:103 , HIS L:105	BINDING SITE FOR RESIDUE MN L 202
12	BC3	SOFTWARE	GLY L:27 , HIS L:28 , ASN L:33 , GLN L:73 , HOH L:317	BINDING SITE FOR RESIDUE SO4 L 203
13	BC4	SOFTWARE	ASP L:67 , ASN L:69 , ASP L:71 , GLN L:73 , GLU L:78 , HOH L:354	BINDING SITE FOR RESIDUE CA L 204
14	BC5	SOFTWARE	SER L:23 , LEU L:26 , HIS L:28 , THR L:31 , GLU L:36 , HOH L:317	BINDING SITE FOR RESIDUE CA L 205
15	BC6	SOFTWARE	ASP S:59 , ASN S:61 , ASP S:63 , ALA S:65 , GLU S:70 , HOH S:235	BINDING SITE FOR RESIDUE CA S 101
16	BC7	SOFTWARE	LYS S:35 , GLY S:50 , ALA S:51 , ASP S:52 , HOH S:239	BINDING SITE FOR RESIDUE GOL S 102
17	BC8	SOFTWARE	ASP K:32 , HOH K:211 , ARG S:31 , GLY S:64 , HOH S:201 , HOH S:233	BINDING SITE FOR RESIDUE GOL S 103
18	BC9	SOFTWARE	HIS S:17 , HIS S:27 , HIS T:91 , HIS T:95 , HIS T:103 , HIS T:105	BINDING SITE FOR RESIDUE MN T 201
19	CC1	SOFTWARE	HIS S:83 , HIS S:87 , HIS T:20 , ASP T:30 , HOH T:370	BINDING SITE FOR RESIDUE MN T 202
20	CC2	SOFTWARE	SER T:23 , LEU T:26 , HIS T:28 , THR T:31 , GLU T:36 , HOH T:317	BINDING SITE FOR RESIDUE CA T 203
21	CC3	SOFTWARE	ASP T:67 , ASN T:69 , ASP T:71 , GLN T:73 , GLU T:78 , HOH T:343	BINDING SITE FOR RESIDUE CA T 204
22	CC4	SOFTWARE	HIS S:27 , PHE S:68 , GLN S:69 , HOH S:255 , TRP T:88 , HIS T:91 , GLU T:92 , HIS T:95 , HOH T:326 , HOH T:375 , ASP V:65 , ARG V:85 , HOH V:331	BINDING SITE FOR RESIDUE GOL T 205
23	CC5	SOFTWARE	GLY T:27 , HIS T:28 , ASN T:33 , GLN T:73	BINDING SITE FOR RESIDUE GOL T 206
24	CC6	SOFTWARE	ASP U:59 , ASN U:61 , ASP U:63 , ALA U:65 , GLU U:70 , HOH U:216	BINDING SITE FOR RESIDUE CA U 101
25	CC7	SOFTWARE	HIS U:17 , HIS U:27 , HIS V:91 , HIS V:95 , HIS V:103 , HIS V:105	BINDING SITE FOR RESIDUE MN V 201
26	CC8	SOFTWARE	GLY V:27 , HIS V:28 , ASN V:33 , GLN V:73 , HOH V:316	BINDING SITE FOR RESIDUE SO4 V 202
27	CC9	SOFTWARE	ASP V:67 , ASN V:69 , ASP V:71 , GLN V:73 , GLU V:78 , HOH V:327	BINDING SITE FOR RESIDUE CA V 203
28	DC1	SOFTWARE	SER V:23 , LEU V:26 , HIS V:28 , THR V:31 , GLU V:36 , HOH V:316	BINDING SITE FOR RESIDUE CA V 204

(no "SS Bond" information available for 4GGF)

Asymmetric Unit

No.	Residues
1	Glu A:88	-	Glu A:89
2	Gly C:100	-	Pro C:101
3	Gly L:100	-	Pro L:101
4	Glu S:88	-	Glu S:89
5	Gly T:100	-	Pro T:101
6	Gly V:100	-	Pro V:101

(no "SAP(SNP)/Variant" information available for 4GGF)

(no "PROSITE Motif" information available for 4GGF)

(no "Exon" information available for 4GGF)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:89
                                                                                                                         
               SCOP domains d4ggfa_ A: Calcyclin (S100)                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                 4ggf A   1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEE  89
                                    10        20        30        40        50        60        70        80

Chain C from PDB  Type:PROTEIN  Length:108
                                                                                                                                            
               SCOP domains d4ggfc_ C: automated matches                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 4ggf C   4 KMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTWASHEKMHEGDEGPGHHHKPGLGE 111
                                    13        23        33        43        53        63        73        83        93       103

Chain K from PDB  Type:PROTEIN  Length:89
                                                                                                                         
               SCOP domains d4ggfk_ K: Calcyclin (S100)                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                 4ggf K   1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEE  89
                                    10        20        30        40        50        60        70        80

Chain L from PDB  Type:PROTEIN  Length:109
                                                                                                                                             
               SCOP domains d4ggfl_ L: automated matches                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 4ggf L   4 KMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTWASHEKMHEGDEGPGHHHKPGLGEG 112
                                    13        23        33        43        53        63        73        83        93       103

Chain S from PDB  Type:PROTEIN  Length:89
                                                                                                                         
               SCOP domains d4ggfs_ S: Calcyclin (S100)                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh.......eehhhhhhhhhhhhhhhhhh.hhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                 4ggf S   1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEE  89
                                    10        20        30        40        50        60        70        80

Chain T from PDB  Type:PROTEIN  Length:109
                                                                                                                                             
               SCOP domains d4ggft_ T: automated matches                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 4ggf T   4 KMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTWASHEKMHEGDEGPGHHHKPGLGEG 112
                                    13        23        33        43        53        63        73        83        93       103

Chain U from PDB  Type:PROTEIN  Length:87
                                                                                                                       
               SCOP domains d4ggfu_ U: Calcyclin (S100)                                                             SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                 4ggf U   1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSH  87
                                    10        20        30        40        50        60        70        80

Chain V from PDB  Type:PROTEIN  Length:109
                                                                                                                                             
               SCOP domains d4ggfv_ V: automated matches                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 4ggf V   4 KMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTWASHEKMHEGDEGPGHHHKPGLGEG 112
                                    13        23        33        43        53        63        73        83        93       103

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: EF Hand-like (739)

Superfamily: EF-hand (657)

Family: S100 proteins (101)

Protein domain: automated matches (32)

Human (Homo sapiens) [TaxId: 9606] (30)

1a	d4ggfc_	C:
1b	d4ggfl_	L:
1c	d4ggft_	T:
1d	d4ggfv_	V:

Protein domain: Calcyclin (S100) (69)

Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606] (3)

2a	d4ggfa_	A:
2b	d4ggfk_	K:
2c	d4ggfs_	S:
2d	d4ggfu_	U:

(no "CATH Domain" information available for 4GGF)

(no "Pfam Domain" information available for 4GGF)

Asymmetric Unit(hide GO term definitions)

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		CA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]
		CC4	[ RasMol ]	+environment [ RasMol ]
		CC5	[ RasMol ]	+environment [ RasMol ]
		CC6	[ RasMol ]	+environment [ RasMol ]
		CC7	[ RasMol ]	+environment [ RasMol ]
		CC8	[ RasMol ]	+environment [ RasMol ]
		CC9	[ RasMol ]	+environment [ RasMol ]
		DC1	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Glu A:88 - Glu A:89	[ RasMol ]
		Glu S:88 - Glu S:89	[ RasMol ]
		Gly C:100 - Pro C:101	[ RasMol ]
		Gly L:100 - Pro L:101	[ RasMol ]
		Gly T:100 - Pro T:101	[ RasMol ]
		Gly V:100 - Pro V:101	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	4ggf
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	S10A8_HUMAN \| P05109
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	S10A9_HUMAN \| P06702
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	S10A8_HUMAN \| P05109
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	S10A9_HUMAN \| P06702
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	S10A8_HUMAN \| P05109	:	1mr8 1xk4 4xjk 5hlo 5hlv 5w1f
	S10A9_HUMAN \| P06702	:	1irj 1xk4 4xjk 5i8n 5w1f

(no "Related Entries Specified in the PDB File" available for 4GGF)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 28)

Sites (28, 28)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 8)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (58, 99)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File