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(-) Description

Title :  SORTASE C1 OF GBS PILUS ISLAND 1
 
Authors :  R. Cozzi, D. M. Prigozhin, T. Alber
Date :  10 Jul 12  (Deposition) - 05 Dec 12  (Release) - 05 Dec 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Cysteine Protease, Extracellular, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Cozzi, D. Prigozhin, R. Rosini, F. Abate, M. J. Bottomley, G. Grandi J. L. Telford, C. D. Rinaudo, D. Maione, T. Alber
Structural Basis For Group B Streptococcus Pilus 1 Sortases C Regulation And Specificity.
Plos One V. 7 49048 2012
PubMed-ID: 23145064  |  Reference-DOI: 10.1371/JOURNAL.PONE.0049048

(-) Compounds

Molecule 1 - SORTASE FAMILY PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 42-263
    Gene: SAG0647
    Organism Scientific: STREPTOCOCCUS AGALACTIAE SEROGROUP V
    Organism Taxid: 216466

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4G1J)

(-) Sites  (0, 0)

(no "Site" information available for 4G1J)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4G1J)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Thr A:226 -Pro A:227
2Arg A:257 -Gln A:258
3Thr B:226 -Pro B:227

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4G1J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4G1J)

(-) Exons   (0, 0)

(no "Exon" information available for 4G1J)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:203
                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh...........hhhhh.....eeeeehhhheeeeeee..hhhhhh..eee............eeeeee..........hhhhhhh....eeeeee..eeeeeeeeeeeee....hhhhh.....eeeeeeeee......eeeeeeeeee................ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4g1j A  42 ASHANINAFKEAVTKIDRVEINRRLELAYAYNASIAGAPALKDPYSVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKTVQKDSKTFRQ 258
                                    51        61        71       |87     ||105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255   
                                                                79|     93|                                                                                                                                                            
                                                                 86     102                                                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:199
                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhh.....eeeeehhhheeeeeee..hhhhhh..eee............eeeeee............hhhhh....eeeeee..eeeeeeeeeeeee....hhhhh.....eeeeeeeee......eeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4g1j B  43 SHANINAFKEAVTKIDRVEINRRLELAYAYNASIAGAKTNGEYPALKDPYSAGVVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVE 246
                                    52        62        72        82        92||     107       117       127       137       147       157       167       177       187       197       207       217       227       237         
                                                                             93|                                                                                                                                                   
                                                                              99
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4G1J)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4G1J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4G1J)

(-) Gene Ontology  (2, 2)

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  Cis Peptide Bonds
    Arg A:257 - Gln A:258   [ RasMol ]  
    Thr A:226 - Pro A:227   [ RasMol ]  
    Thr B:226 - Pro B:227   [ RasMol ]  
 
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        Q8E0S7_STRA5 | Q8E0S7: 3rbi 3rbj 3rbk 3tb7 3tbe

(-) Related Entries Specified in the PDB File

4g1h