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(-) Description

Title :  CRYSTAL STRUCTURE OF ABC TRANSPORTER FROM R. PALUSTRIS - SOLUTE BINDING PROTEIN (RPA0668) IN COMPLEX WITH BENZOATE
 
Authors :  K. Michalska, J. C. Mack, S. Zerbs, F. R. Collart, A. Joachimiak, Midwes For Structural Genomics (Mcsg)
Date :  26 Apr 12  (Deposition) - 23 May 12  (Release) - 09 Jan 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.84
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Abc Transporter, Solute Binding Protein, Benzoate- Derivatives Binding, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Michalska, C. Chang, J. C. Mack, S. Zerbs, A. Joachimiak, F. R. Collart
Characterization Of Transport Proteins For Aromatic Compounds Derived From Lignin: Benzoate Derivative Binding Proteins.
J. Mol. Biol. V. 423 555 2012
PubMed-ID: 22925578  |  Reference-DOI: 10.1016/J.JMB.2012.08.017

(-) Compounds

Molecule 1 - PUTATIVE ABC TRANSPORTER SUBUNIT, SUBSTRATE-BINDING COMPONENT
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: HBAE, RPA0668
    Organism Scientific: RHODOPSEUDOMONAS PALUSTRIS
    Organism Taxid: 258594
    Strain: CGA009

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 7)

Asymmetric/Biological Unit (2, 7)
No.NameCountTypeFull Name
1BEZ1Ligand/IonBENZOIC ACID
2MSE6Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:46 , LEU A:49 , VAL A:107 , HIS A:108 , SER A:109 , ASN A:130 , ALA A:131 , GLY A:132 , TYR A:178 , ALA A:180 , MSE A:184BINDING SITE FOR RESIDUE BEZ A 401

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:141 -A:389

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gly A:105 -Thr A:106
2Phe A:207 -Pro A:208

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EVR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EVR)

(-) Exons   (0, 0)

(no "Exon" information available for 4EVR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:360
                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee.....hhhhhhhhhhhhhhhhhhh..ee..eeeeeeeee...hhhhhhhhhhhhhhh....eeee..hhhhhhhhhhhhhhhh..eee....hhhhhh......eee...hhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhhhhh..eeeeeeee......hhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhh.....eeee.hhh..hhhhhhhhhh..eeee.......hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh..eee..eee...........eeeeeee..eeeeeeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4evr A  32 GALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVHSGVAmAmVKIAREDGIPTIVPNAGADIITRAmCAPNVFRTSFANGQIGRATGDAmIKAGLKKAVTVTWKYAAGEEmVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFIKDYAAANLGIPLWGPGFLTDGVEAAAGPAGDGIKTVLHYVSDLDNAENQAFVKSFEAAYKIPPDVFAVQGWDAGQLLDAGVKAVGGDVAKRKELNAAmAAASFASPRGPFKLSAAHNPVQNFYLRELKGGKSVNLGLAAPAVADEAIGCKL 391
                                    41        51        61        71        81        91       101       111 | |   121       131       141       151       161 |     171       181  |    191       201       211       221       231       241       251       261       271       281       291       301       311       321       331      |341       351       361       371       381       391
                                                                                                           113-MSE                    140-MSE                163-MSE              184-MSE                                                                                                                                                   338-MSE                                                 
                                                                                                             115-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4EVR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EVR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EVR)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4EVR)

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  Cis Peptide Bonds
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        G3XCQ4_RHOPA | G3XCQ4: 4evq

(-) Related Entries Specified in the PDB File

4evq RELATED ID: MCSG-APC102204 RELATED DB: TARGETTRACK