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(-) Description

Title :  CRYSTAL STRUCTURE OF PADR FAMILY TRANSCRIPTIONAL REGULATOR FROM EGGERTHELLA LENTA DSM 2243
 
Authors :  C. Chang, H. Li, J. Bearden, A. Joachimiak, Midwest Center For Struc Genomics (Mcsg)
Date :  06 Apr 12  (Deposition) - 25 Apr 12  (Release) - 25 Apr 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  B  (2x)
Keywords :  Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Transcriptional Regulator, Transcription Regulator (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, H. Li, J. Bearden, A. Joachimiak
Crystal Structure Of Padr Family Transcriptional Regulator From Eggerthella Lenta Dsm 2243
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL REGULATOR, PADR-LIKE FAMILY
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3) MAGIC
    Expression System Taxid: 469008
    Gene: ELEN_1533
    Organism Scientific: EGGERTHELLA LENTA
    Organism Taxid: 479437
    Strain: ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): A 
Biological Unit 2 (2x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 9)

Asymmetric Unit (2, 9)
No.NameCountTypeFull Name
1EOH1Ligand/IonETHANOL
2MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (2, 10)
No.NameCountTypeFull Name
1EOH2Ligand/IonETHANOL
2MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name
1EOH-1Ligand/IonETHANOL
2MSE8Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:32 , GLY A:33 , TYR A:34 , TYR A:53 , LYS A:78BINDING SITE FOR RESIDUE EOH A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EJO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4EJO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EJO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EJO)

(-) Exons   (0, 0)

(no "Exon" information available for 4EJO)

(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:112
                                                                                                                                                
               SCOP domains d4ejoa_ A: automated matches                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhh....hhhhhhhhhhhhhhh..eeeeeee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                 4ejo A   0 AmAYDDIVSSmVLELRRGTLVmLVLSQLREPAYGYALVKSLADHGIPIEANTLYPLmRRLESQGLLASEWDNGGSKPRKYYRTTDEGLRVLREVEAQWHVLCDGVGKLLETN 111
                             |       9|       19 |      29        39        49      | 59        69        79        89        99       109  
                             |       10-MSE     21-MSE                             56-MSE                                                   
                             1-MSE                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:112
                                                                                                                                                
               SCOP domains d4ejob_ B: automated matches                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhh.....hhhhhhhhhhh..eeeeee.....eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                 4ejo B   0 AmAYDDIVSSmVLELRRGTLVmLVLSQLREPAYGYALVKSLADHGIPITLYPLmRRLESQGLLASEWDNGGKPRKYYRTTDEGLRVLREVEAQWHVLCDGVGKLLETNGEDR 115
                             |       9|       19 |      29        39       |52   |    62        72||      83        93       103       113  
                             1-MSE   10-MSE     21-MSE                    47|    |               73|                                        
                                                                           51    |                75                                        
                                                                                56-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EJO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EJO)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4EJO)

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