4E8M - JenaLib

Asymmetric Unit (48, 48)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	G A:142 , C A:145	BINDING SITE FOR RESIDUE MG A 401
02	AC2	SOFTWARE	G A:359 , U A:375 , C A:377 , MG A:403	BINDING SITE FOR RESIDUE MG A 402
03	AC3	SOFTWARE	C A:358 , G A:359 , C A:377 , MG A:402 , HOH A:508	BINDING SITE FOR RESIDUE MG A 403
04	AC4	SOFTWARE	G A:3 , U A:4	BINDING SITE FOR RESIDUE MG A 404
05	AC5	SOFTWARE	C A:360 , G A:374	BINDING SITE FOR RESIDUE MG A 405
06	AC6	SOFTWARE	G A:324 , G A:325	BINDING SITE FOR RESIDUE MG A 406
07	AC7	SOFTWARE	G A:46 , U A:47 , U A:59 , HOH A:513 , HOH A:514	BINDING SITE FOR RESIDUE MG A 407
08	AC8	SOFTWARE	G A:107	BINDING SITE FOR RESIDUE MG A 408
09	AC9	SOFTWARE	C A:372	BINDING SITE FOR RESIDUE MG A 409
10	BC1	SOFTWARE	U A:363 , U A:379	BINDING SITE FOR RESIDUE MG A 410
11	BC2	SOFTWARE	C A:119 , A A:174 , U A:238 , G A:239	BINDING SITE FOR RESIDUE MG A 411
12	BC3	SOFTWARE	A A:105	BINDING SITE FOR RESIDUE MG A 412
13	BC4	SOFTWARE	G A:136 , U A:225	BINDING SITE FOR RESIDUE MG A 413
14	BC5	SOFTWARE	U A:66 , A A:67	BINDING SITE FOR RESIDUE MG A 414
15	BC6	SOFTWARE	U A:96	BINDING SITE FOR RESIDUE MG A 415
16	BC7	SOFTWARE	U A:26	BINDING SITE FOR RESIDUE MG A 416
17	BC8	SOFTWARE	U A:66 , A A:67 , G A:68	BINDING SITE FOR RESIDUE MG A 417
18	BC9	SOFTWARE	A A:154 , G A:155	BINDING SITE FOR RESIDUE MG A 418
19	CC1	SOFTWARE	G A:5 , U A:285	BINDING SITE FOR RESIDUE MG A 419
20	CC2	SOFTWARE	G A:382 , G A:383	BINDING SITE FOR RESIDUE MG A 420
21	CC3	SOFTWARE	A A:283	BINDING SITE FOR RESIDUE MG A 421
22	CC4	SOFTWARE	G A:142	BINDING SITE FOR RESIDUE MG A 422
23	CC5	SOFTWARE	C A:286 , A A:287 , G A:288 , G A:321	BINDING SITE FOR RESIDUE MG A 423
24	CC6	SOFTWARE	A A:290 , G A:354 , A A:355 , A A:356	BINDING SITE FOR RESIDUE MG A 424
25	CC7	SOFTWARE	G A:266	BINDING SITE FOR RESIDUE K A 425
26	CC8	SOFTWARE	G A:14 , G A:15	BINDING SITE FOR RESIDUE K A 426
27	CC9	SOFTWARE	G A:269	BINDING SITE FOR RESIDUE K A 427
28	DC1	SOFTWARE	G A:275	BINDING SITE FOR RESIDUE K A 428
29	DC2	SOFTWARE	G A:275 , A A:277	BINDING SITE FOR RESIDUE K A 430
30	DC3	SOFTWARE	G A:28	BINDING SITE FOR RESIDUE K A 431
31	DC4	SOFTWARE	G A:264	BINDING SITE FOR RESIDUE K A 432
32	DC5	SOFTWARE	C A:86 , G A:87 , U A:96 , G A:97	BINDING SITE FOR RESIDUE K A 433
33	DC6	SOFTWARE	G A:3 , U A:4 , G A:5 , A A:376	BINDING SITE FOR RESIDUE K A 434
34	DC7	SOFTWARE	G A:79	BINDING SITE FOR RESIDUE K A 435
35	DC8	SOFTWARE	G A:32 , G A:34 , A A:50	BINDING SITE FOR RESIDUE K A 436
36	DC9	SOFTWARE	G A:288 , C A:358 , G A:359 , C A:377	BINDING SITE FOR RESIDUE K A 437
37	EC1	SOFTWARE	U A:332	BINDING SITE FOR RESIDUE K A 438
38	EC2	SOFTWARE	G A:90 , G A:92	BINDING SITE FOR RESIDUE K A 439
39	EC3	SOFTWARE	G A:194 , U A:195	BINDING SITE FOR RESIDUE K A 440
40	EC4	SOFTWARE	A A:319 , G A:320	BINDING SITE FOR RESIDUE K A 441
41	EC5	SOFTWARE	U A:47 , G A:48 , A A:49 , G A:55 , A A:56 , G A:58 , HOH A:506	BINDING SITE FOR RESIDUE SPM A 443
42	EC6	SOFTWARE	G A:30 , U A:31 , G A:32 , A A:35 , G A:36 , U A:37	BINDING SITE FOR RESIDUE SPM A 444
43	EC7	SOFTWARE	U A:301 , G A:315 , G A:316 , G A:317	BINDING SITE FOR RESIDUE EPE A 445
44	EC8	SOFTWARE	C A:38 , C A:39 , G A:242 , G A:243 , G A:244	BINDING SITE FOR RESIDUE EPE A 446
45	EC9	SOFTWARE	U A:71 , G A:111 , C A:112 , G A:113 , G A:114 , A A:115	BINDING SITE FOR RESIDUE EPE A 447
46	FC1	SOFTWARE	C A:76 , A A:77 , U A:103 , G A:104	BINDING SITE FOR RESIDUE EPE A 448
47	FC2	SOFTWARE	G A:97 , G A:98	BINDING SITE FOR RESIDUE EPE A 449
48	FC3	SOFTWARE	C A:116 , G A:117 , HOH A:510	BINDING SITE FOR RESIDUE EPE A 450

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:RNA  Length:394
                                                                                                                                                                                                                                                                                                                                                                                                                                          
                 4e8m A  -2 GGGGUGUGCCCGGCAUGGGUGCAGUCUAUAGGGUGAGAGUCCCGAACUGUGAAGGCAGAAGUAACAGUUAGCCUAACGCAAGGGUGUCCGUGGCGACAUGGAAUCUGAAGGAAGCGGACGGCAAACCUUCGGUCUGAGGAACACGAACUUCAUAUGAGGCUAGGUAUCAAUGGAUGAGUUUGCAUAACAAAACAAAGUCCUUUCUGCCAAAGUUGGUACAGAGUAAAUGAAGCAGAUUGAUGAAGGGAAAGACUGCAUUCUUACCCGGGGAGGUCUGGAAACAGAAGUCAGCAGAAGUCAUAGUACCCUGUUCGCAGGGGAAGGACGGAACAAGUAUGGCGUUCGCGCCUAAGCUUGAACCGCCGUAUACCGAACGGUACGUACGGUGGUGUGG 391
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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	4e8m
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 50)

Sites (48, 48)