4E8R - JenaLib

Asymmetric Unit (60, 60)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	G A:3 , U A:4	BINDING SITE FOR RESIDUE MG A 402
02	AC2	SOFTWARE	G A:136 , U A:225	BINDING SITE FOR RESIDUE MG A 403
03	AC3	SOFTWARE	A A:290 , U A:387 , G A:388	BINDING SITE FOR RESIDUE MG A 404
04	AC4	SOFTWARE	U A:221	BINDING SITE FOR RESIDUE MG A 405
05	AC5	SOFTWARE	C A:360 , G A:374	BINDING SITE FOR RESIDUE MG A 406
06	AC6	SOFTWARE	G A:46 , U A:47	BINDING SITE FOR RESIDUE MG A 407
07	AC7	SOFTWARE	G A:107	BINDING SITE FOR RESIDUE MG A 408
08	AC8	SOFTWARE	C A:372 , G A:373	BINDING SITE FOR RESIDUE MG A 409
09	AC9	SOFTWARE	HOH A:920	BINDING SITE FOR RESIDUE MG A 410
10	BC1	SOFTWARE	A A:105	BINDING SITE FOR RESIDUE MG A 411
11	BC2	SOFTWARE	U A:66 , A A:67	BINDING SITE FOR RESIDUE MG A 412
12	BC3	SOFTWARE	G A:284	BINDING SITE FOR RESIDUE MG A 413
13	BC4	SOFTWARE	G A:169	BINDING SITE FOR RESIDUE MG A 414
14	BC5	SOFTWARE	U A:66 , A A:67 , G A:68 , A A:120 , HOH A:908	BINDING SITE FOR RESIDUE MG A 415
15	BC6	SOFTWARE	A A:355 , A A:356	BINDING SITE FOR RESIDUE MG A 416
16	BC7	SOFTWARE	G A:288 , G A:382 , G A:383 , HOH A:922	BINDING SITE FOR RESIDUE MG A 417
17	BC8	SOFTWARE	G A:142	BINDING SITE FOR RESIDUE MG A 418
18	BC9	SOFTWARE	G A:374 , U A:375 , C A:377 , MG A:420	BINDING SITE FOR RESIDUE MG A 419
19	CC1	SOFTWARE	C A:358 , G A:359 , C A:377 , MG A:419	BINDING SITE FOR RESIDUE MG A 420
20	CC2	SOFTWARE	A A:283 , HOH A:912	BINDING SITE FOR RESIDUE MG A 422
21	CC3	SOFTWARE	G A:324 , G A:325	BINDING SITE FOR RESIDUE MG A 423
22	CC4	SOFTWARE	G A:15 , G A:16 , U A:255 , U A:256	BINDING SITE FOR RESIDUE CS A 424
23	CC5	SOFTWARE	G A:385	BINDING SITE FOR RESIDUE CS A 425
24	CC6	SOFTWARE	G A:133 , A A:134 , G A:135	BINDING SITE FOR RESIDUE CS A 426
25	CC7	SOFTWARE	G A:58	BINDING SITE FOR RESIDUE CS A 427
26	CC8	SOFTWARE	G A:29 , G A:30	BINDING SITE FOR RESIDUE CS A 428
27	CC9	SOFTWARE	U A:273 , G A:274 , G A:275	BINDING SITE FOR RESIDUE CS A 429
28	DC1	SOFTWARE	U A:13 , A A:110 , G A:111 , C A:112 , EPE A:462	BINDING SITE FOR RESIDUE CS A 430
29	DC2	SOFTWARE	G A:266 , G A:267 , HOH A:906	BINDING SITE FOR RESIDUE CS A 431
30	DC3	SOFTWARE	G A:320 , G A:321	BINDING SITE FOR RESIDUE CS A 432
31	DC4	SOFTWARE	A A:333 , G A:335 , G A:336	BINDING SITE FOR RESIDUE CS A 433
32	DC5	SOFTWARE	U A:4 , G A:107 , U A:375 , A A:376	BINDING SITE FOR RESIDUE CS A 434
33	DC6	SOFTWARE	G A:275 , A A:277	BINDING SITE FOR RESIDUE CS A 435
34	DC7	SOFTWARE	G A:264 , G A:265	BINDING SITE FOR RESIDUE CS A 436
35	DC8	SOFTWARE	C A:86 , G A:87 , A A:95 , U A:96 , G A:97	BINDING SITE FOR RESIDUE CS A 437
36	DC9	SOFTWARE	G A:3 , U A:4 , G A:5 , A A:376	BINDING SITE FOR RESIDUE CS A 438
37	EC1	SOFTWARE	G A:79 , G A:80	BINDING SITE FOR RESIDUE CS A 439
38	EC2	SOFTWARE	G A:32 , A A:33 , G A:34 , A A:50	BINDING SITE FOR RESIDUE CS A 440
39	EC3	SOFTWARE	C A:358 , G A:359 , C A:377	BINDING SITE FOR RESIDUE CS A 441
40	EC4	SOFTWARE	G A:331 , U A:332	BINDING SITE FOR RESIDUE CS A 442
41	EC5	SOFTWARE	U A:88 , G A:89 , G A:90	BINDING SITE FOR RESIDUE CS A 443
42	EC6	SOFTWARE	C A:119 , A A:174 , U A:238 , G A:239	BINDING SITE FOR RESIDUE CS A 444
43	EC7	SOFTWARE	G A:80 , G A:81 , A A:100 , U A:101	BINDING SITE FOR RESIDUE CS A 445
44	EC8	SOFTWARE	G A:128 , G A:129 , U A:238	BINDING SITE FOR RESIDUE CS A 446
45	EC9	SOFTWARE	A A:268 , G A:269 , G A:270 , HOH A:921	BINDING SITE FOR RESIDUE CS A 447
46	FC1	SOFTWARE	G A:52 , G A:203	BINDING SITE FOR RESIDUE CS A 448
47	FC2	SOFTWARE	G A:378	BINDING SITE FOR RESIDUE CS A 449
48	FC3	SOFTWARE	A A:95 , A A:283 , G A:284	BINDING SITE FOR RESIDUE CS A 450
49	FC4	SOFTWARE	G A:194	BINDING SITE FOR RESIDUE CS A 451
50	FC5	SOFTWARE	A A:120 , U A:238 , G A:239	BINDING SITE FOR RESIDUE CS A 452
51	FC6	SOFTWARE	G A:32 , G A:34	BINDING SITE FOR RESIDUE CS A 454
52	FC7	SOFTWARE	G A:58	BINDING SITE FOR RESIDUE CS A 455
53	FC8	SOFTWARE	G A:58	BINDING SITE FOR RESIDUE CS A 456
54	FC9	SOFTWARE	C A:358 , A A:376 , C A:377	BINDING SITE FOR RESIDUE CS A 457
55	GC1	SOFTWARE	C A:337 , C A:345 , C A:346	BINDING SITE FOR RESIDUE CS A 458
56	GC2	SOFTWARE	G A:314 , G A:315 , G A:316 , G A:317	BINDING SITE FOR RESIDUE EPE A 459
57	GC3	SOFTWARE	C A:116 , G A:117	BINDING SITE FOR RESIDUE EPE A 460
58	GC4	SOFTWARE	C A:38 , G A:242 , G A:243 , G A:244	BINDING SITE FOR RESIDUE EPE A 461
59	GC5	SOFTWARE	G A:14 , U A:71 , G A:111 , C A:112 , G A:113 , G A:114 , A A:115 , CS A:430	BINDING SITE FOR RESIDUE EPE A 462
60	GC6	SOFTWARE	U A:96 , G A:97 , G A:98 , HOH A:904 , HOH A:905	BINDING SITE FOR RESIDUE EPE A 463

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:DNA/RNA  Length:393
                                                                                                                                                                                                                                                                                                                                                                                                                                         
                 4e8r A  -2 GGGGUGUGCCCGGCAUGGGUGCAGUCUAUAGGGUGAGAGUCCCGAACUGUGAAGGCAGAAGUAACAGUUAGCCUAACGCAAGGGUGUCCGUGGCGACAUGGAAUCUGAAGGAAGCGGACGGCAAACCUUCGGUCUGAGGAACACGAACUUCAUAUGAGGCUAGGUAUCAAUGGAUGAGUUUGCAUAACAAAACAAAGUCCUUUCUGCCAAAGUUGGUACAGAGUAAAUGAAGCAGAUUGAUGAAGGGAAAGACUGCAUUCUUACCCGGGGAGGUCUGGAAACAGAAGUCAGCAGAAGUCAUAGUACCCUGUUCGCAGGGGAAGGACGGAACAAGUAUGGCGUUCGCGCCUAAGCUUGAACCGCCGUAUACCGAACGGUACGUACGGUGGUGUG 390
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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	Cis Peptide Bonds
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	4e8r
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 63)

Sites (60, 60)