4DO1 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   THE CRYSTAL STRUCTURES OF 4-METHOXYBENZOATE BOUND CYP199A4

Authors :   W. Zhou, S. G. Bell, W. Yang, A. B. H. Tan, R. Zhou, E. O. D. Johnson, A. Zhan L. -L. Wong

Date :   09 Feb 12 (Deposition) - 15 Aug 12 (Release) - 15 Aug 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)

Keywords :   Cytochrome P450, Secondary Metabolites Biosynthesis, Transport, Catabolism, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. G. Bell, W. Yang, A. B. H. Tan, R. Zhou, E. O. D. Johnson, A. Zhang, W. Zhou, Z. Rao, L. -L. Wong
The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199A2 And Cyp199A4: Structural Changes On Substrate Binding And The Identification Of An Anion Binding Site
Dalton Trans V. 41 8703 2012
PubMed-ID: 22695988 | Reference-DOI: 10.1039/C2DT30783A

Molecule 1 - CYTOCHROME P450
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28A
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	RPB_3613
	Organism Scientific	:	RHODOPSEUDOMONAS PALUSTRIS
	Organism Taxid	:	316058
	Strain	:	HAA2

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 21)

No.	Name	Count	Type	Full Name
1	ANN	4	Ligand/Ion	4-METHOXYBENZOIC ACID
2	CL	4	Ligand/Ion	CHLORIDE ION
3	GOL	4	Ligand/Ion	GLYCEROL
4	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
5	SO4	5	Ligand/Ion	SULFATE ION

Biological Unit 1 (4, 4)

No.	Name	Count	Type	Full Name
1	ANN	1	Ligand/Ion	4-METHOXYBENZOIC ACID
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	GOL	1	Ligand/Ion	GLYCEROL
4	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
5	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 2 (4, 5)

No.	Name	Count	Type	Full Name
1	ANN	1	Ligand/Ion	4-METHOXYBENZOIC ACID
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	GOL	1	Ligand/Ion	GLYCEROL
4	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
5	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 3 (4, 4)

No.	Name	Count	Type	Full Name
1	ANN	1	Ligand/Ion	4-METHOXYBENZOIC ACID
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	GOL	1	Ligand/Ion	GLYCEROL
4	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
5	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 4 (4, 4)

No.	Name	Count	Type	Full Name
1	ANN	1	Ligand/Ion	4-METHOXYBENZOIC ACID
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	GOL	1	Ligand/Ion	GLYCEROL
4	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
5	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (21, 21)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ILE A:97 , LEU A:98 , HIS A:105 , ARG A:109 , PHE A:160 , ALA A:248 , GLY A:249 , THR A:252 , THR A:253 , PHE A:298 , ARG A:300 , GLY A:350 , PHE A:351 , GLY A:352 , HIS A:356 , CYS A:358 , VAL A:359 , GLY A:360 , ALA A:364 , ANN A:502 , HOH A:637 , HOH A:643	BINDING SITE FOR RESIDUE HEM A 501
02	AC2	SOFTWARE	ARG A:92 , SER A:95 , ILE A:97 , PHE A:182 , SER A:244 , SER A:247 , ALA A:248 , PHE A:298 , HEM A:501 , HOH A:645	BINDING SITE FOR RESIDUE ANN A 502
03	AC3	SOFTWARE	ARG A:109 , SER A:113 , GOL A:504 , HOH A:652 , HOH A:817 , HOH A:952 , HOH A:1016 , LYS C:114	BINDING SITE FOR RESIDUE SO4 A 503
04	AC4	SOFTWARE	SER A:113 , LEU A:116 , SER A:117 , VAL A:359 , GLN A:361 , LEU A:362 , SO4 A:503 , HOH A:1091 , HOH A:1123	BINDING SITE FOR RESIDUE GOL A 504
05	AC5	SOFTWARE	ARG A:92 , TYR A:177 , GLN A:203	BINDING SITE FOR RESIDUE CL A 505
06	AC6	SOFTWARE	ILE B:97 , LEU B:98 , HIS B:105 , ARG B:109 , ALA B:248 , GLY B:249 , THR B:252 , THR B:253 , VAL B:295 , PHE B:298 , ARG B:300 , GLY B:350 , PHE B:351 , GLY B:352 , HIS B:356 , CYS B:358 , VAL B:359 , GLY B:360 , ALA B:364 , ANN B:502 , HOH B:661 , HOH B:1041	BINDING SITE FOR RESIDUE HEM B 501
07	AC7	SOFTWARE	ARG B:92 , SER B:95 , ILE B:97 , PHE B:182 , SER B:244 , SER B:247 , ALA B:248 , PHE B:298 , HEM B:501 , HOH B:643	BINDING SITE FOR RESIDUE ANN B 502
08	AC8	SOFTWARE	ARG B:109 , SER B:113 , GOL B:505 , HOH B:638 , HOH B:789 , HOH B:853 , LYS D:114	BINDING SITE FOR RESIDUE SO4 B 503
09	AC9	SOFTWARE	ARG B:78 , LYS B:86 , LYS B:87 , GLY B:316 , HOH B:1057 , HOH B:1067 , THR D:40	BINDING SITE FOR RESIDUE SO4 B 504
10	BC1	SOFTWARE	SER B:113 , LEU B:116 , SER B:117 , VAL B:359 , GLN B:361 , LEU B:362 , SO4 B:503 , HOH B:835 , HOH B:947	BINDING SITE FOR RESIDUE GOL B 505
11	BC2	SOFTWARE	ARG B:92 , TYR B:177 , GLN B:203 , HOH B:709	BINDING SITE FOR RESIDUE CL B 506
12	BC3	SOFTWARE	ILE C:97 , LEU C:98 , HIS C:105 , ARG C:109 , PHE C:160 , ALA C:248 , GLY C:249 , THR C:252 , THR C:253 , VAL C:295 , PHE C:298 , ARG C:300 , LEU C:323 , GLY C:350 , PHE C:351 , GLY C:352 , HIS C:356 , CYS C:358 , VAL C:359 , GLY C:360 , ALA C:364 , ANN C:502 , HOH C:627 , HOH C:629	BINDING SITE FOR RESIDUE HEM C 501
13	BC4	SOFTWARE	ARG C:92 , SER C:95 , LEU C:98 , PHE C:182 , SER C:244 , SER C:247 , ALA C:248 , PHE C:298 , HEM C:501 , HOH C:1013	BINDING SITE FOR RESIDUE ANN C 502
14	BC5	SOFTWARE	LYS A:114 , HOH A:976 , ARG C:109 , SER C:113 , GOL C:504 , HOH C:648 , HOH C:744 , HOH C:1144 , HOH C:1149	BINDING SITE FOR RESIDUE SO4 C 503
15	BC6	SOFTWARE	SER C:113 , LEU C:116 , SER C:117 , VAL C:359 , GLN C:361 , LEU C:362 , SO4 C:503 , HOH C:1130	BINDING SITE FOR RESIDUE GOL C 504
16	BC7	SOFTWARE	ARG C:92 , TYR C:177 , GLN C:203	BINDING SITE FOR RESIDUE CL C 505
17	BC8	SOFTWARE	ILE D:97 , LEU D:98 , HIS D:105 , ARG D:109 , PHE D:160 , ALA D:248 , GLY D:249 , THR D:252 , THR D:253 , VAL D:295 , PHE D:298 , ARG D:300 , LEU D:323 , GLY D:350 , PHE D:351 , GLY D:352 , HIS D:356 , CYS D:358 , VAL D:359 , GLY D:360 , ALA D:364 , ANN D:502 , HOH D:632 , HOH D:636	BINDING SITE FOR RESIDUE HEM D 501
18	BC9	SOFTWARE	ARG D:92 , SER D:95 , LEU D:98 , PHE D:182 , SER D:244 , SER D:247 , ALA D:248 , PHE D:298 , HEM D:501 , HOH D:1014	BINDING SITE FOR RESIDUE ANN D 502
19	CC1	SOFTWARE	LYS B:114 , ARG D:109 , SER D:113 , GOL D:504 , HOH D:644 , HOH D:843 , HOH D:1079	BINDING SITE FOR RESIDUE SO4 D 503
20	CC2	SOFTWARE	SER D:113 , LEU D:116 , SER D:117 , VAL D:359 , GLN D:361 , SO4 D:503 , HOH D:818	BINDING SITE FOR RESIDUE GOL D 504
21	CC3	SOFTWARE	ARG D:92 , TYR D:177 , GLN D:203	BINDING SITE FOR RESIDUE CL D 505

(no "SS Bond" information available for 4DO1)

Asymmetric Unit

No.	Residues
1	Pro A:102	-	Pro A:103
2	Pro B:102	-	Pro B:103
3	Pro C:102	-	Pro C:103
4	Pro D:102	-	Pro D:103

(no "SAP(SNP)/Variant" information available for 4DO1)

(no "PROSITE Motif" information available for 4DO1)

(no "Exon" information available for 4DO1)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:393
 aligned with Q2IU02_RHOP2 | Q2IU02 from UniProtKB/TrEMBL  Length:410

    Alignment length:393
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407   
         Q2IU02_RHOP2    18 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 410
               SCOP domains d4do1a_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee.....hhhhhhhhhhhhhhhhhhh..eee....eeee.hhhhhhhhhh....ee.............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheee......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...eeeeee...eee..eee....eeeeehhhhh................................hhhhhhhhhhhhhhhhhhheeeeee....eee......eeee.eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4do1 A  17 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 409
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406

Chain B from PDB  Type:PROTEIN  Length:393
 aligned with Q2IU02_RHOP2 | Q2IU02 from UniProtKB/TrEMBL  Length:410

    Alignment length:393
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407   
         Q2IU02_RHOP2    18 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 410
               SCOP domains d4do1b_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee.....hhhhhhhhhhhhhhhhhhh..eee....eeee.hhhhhhhhhh....ee.............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheee......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...eeeeee...eee..eee....eeeeehhhhh................................hhhhhhhhhhhhhhhhhhheeeeee....eee......eeee.eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4do1 B  17 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 409
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406

Chain C from PDB  Type:PROTEIN  Length:393
 aligned with Q2IU02_RHOP2 | Q2IU02 from UniProtKB/TrEMBL  Length:410

    Alignment length:393
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407   
         Q2IU02_RHOP2    18 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 410
               SCOP domains d4do1c_ C: automated matches                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee.....hhhhhhhhhhhhhhhhhhh..eee....eeee.hhhhhhhhhh....ee.............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheee......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...eeeeee...eee..eee....eeeeehhhhh................................hhhhhhhhhhhhhhhhhhheeeeee....eee......eeee.eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4do1 C  17 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 409
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406

Chain D from PDB  Type:PROTEIN  Length:393
 aligned with Q2IU02_RHOP2 | Q2IU02 from UniProtKB/TrEMBL  Length:410

    Alignment length:393
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407   
         Q2IU02_RHOP2    18 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 410
               SCOP domains d4do1d_ D: automated matches                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee.....hhhhhhhhhhhhhhhhhhh..eee....eeee.hhhhhhhhhh....ee.............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheee......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...eeeeee...eee..eee....eeeeehhhhh................................hhhhhhhhhhhhhhhhhhheeeeee....eee......eeee.eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4do1 D  17 TIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 409
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: Cytochrome P450 (480)

Superfamily: Cytochrome P450 (480)

Family: automated matches (157)

Protein domain: automated matches (157)

Rhodopseudomonas palustris [TaxId: 316058] (6)

1a	d4do1a_	A:
1b	d4do1b_	B:
1c	d4do1c_	C:
1d	d4do1d_	D:

(no "CATH Domain" information available for 4DO1)

(no "Pfam Domain" information available for 4DO1)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (Q2IU02_RHOP2 | Q2IU02)

molecular function
	GO:0020037	heme binding	Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
	GO:0005506	iron ion binding	Interacting selectively and non-covalently with iron (Fe) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0004497	monooxygenase activity	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric Unit
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	Cis Peptide Bonds
		Pro A:102 - Pro A:103	[ RasMol ]
		Pro B:102 - Pro B:103	[ RasMol ]
		Pro C:102 - Pro C:103	[ RasMol ]
		Pro D:102 - Pro D:103	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]

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	4do1
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	Q2IU02_RHOP2 \| Q2IU02
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UniProtKB/TrEMBL
	Q2IU02_RHOP2 \| Q2IU02	:	4dnz 4egm 4egn 4ego 4egp

4dnz	THE SAME PROTEIN SUBSTRATE FREE
4egm	THE SAME PROTEIN COMPLEXED WITH 4-ETHYLBENZOIC ACID
4egn	THE SAME PROTEIN COMPLEXED WITH VERATIC ACID
4ego	THE SAME PROTEIN COMPLEXED WITH INDOLE-6-CARBOXYLIC ACID
4egp	THE SAME PROTEIN COMPLEXED WITH 2-NAPHTHOIC ACID

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 21)

Sites (21, 21)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File