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(-) Description

Title :  CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 9 A DOMAIN (EPA9A) FROM CANDIDA GLABRATA IN COMPLEX WITH LACTOSE
 
Authors :  M. Kock, M. Maestre-Reyna, R. Diderrich, H. -U. Moesch, L. -O. Essen
Date :  31 Jan 14  (Deposition) - 18 Feb 15  (Release) - 18 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym./Biol. Unit :  A
Keywords :  Cell Adhesion, Lectin, Tissue Invasion, Pathogenicity (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Diderrich, M. Kock, M. Maestre-Reyna, S. Rupp, L. -O. Essen, H. -U. Moesch
The Structure And Function Of The Epithelial Adhesins (Working)
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - EPITHELIAL ADHESIN 9
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI B
    Expression System Taxid: 37762
    Expression System Variant: SHUFFLE T7 EXPRESS (C3029)
    Expression System Vector: PET28A
    Expression System Vector Type: PLASMID
    Fragment: ADHESION DOMAIN (A DOMAIN), RESIDUES 39-305
    Organism Scientific: CANDIDA GLABRATA
    Organism Taxid: 284593
    Strain: CBS 138

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric/Biological Unit (3, 3)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
2CL1Ligand/IonCHLORIDE ION
3LAT1Ligand/IonBETA-LACTOSE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:196 , ASP A:197 , ASN A:256 , ASP A:258 , HIS A:260 , LAT A:1295BINDING SITE FOR RESIDUE CA A1294
2AC2SOFTWARECYS A:151 , ASP A:196 , ASP A:197 , TRP A:230 , ARG A:257 , ASP A:258 , TYR A:259 , HIS A:260 , CA A:1294 , HOH A:2101 , HOH A:2200BINDING SITE FOR RESIDUE LAT A1295
3AC3SOFTWAREGLU A:50 , GLY A:204 , SER A:205 , LYS A:206 , HOH A:2096BINDING SITE FOR RESIDUE CL A1296

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:52 -A:211
2A:109 -A:151
3A:212 -A:293

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Asp A:196 -Asp A:197
2Trp A:230 -Pro A:231

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4CP0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4CP0)

(-) Exons   (0, 0)

(no "Exon" information available for 4CP0)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhh.eee.eeeeeee..........hhhhhh.....hhhhh..eeeeeeee.....eee..........ee..hhhhh....ee...eeeeeeeee.....eeeeeeeeee.eeeeee.........hhhhhh.......eeee.....eeeeeeee.....eeeeeeeee....eeeeeeee..............eeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cp0 A  44 AHYPRPEGCSSPPNAVSVGLHMDLYNYPYLYVKQCWNPEYQDPNFPRYGYKKYGSFGSSDHVNGKISWDHNEFKEGCKPIMARLPTAYNYPAKITFSNFTMVLSGYFKPKSTGLYKFEIHADDFILFNFGSKNAFECCNREESIDNFGPYVAYAMWPNEADQELEVYLFEDSYYPIRLFYNNRDYHSKFMVGFYPPNTEEITYDFDGYLYMLDDTGNEC 293
                                    53        63        73  ||   114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284         
                                                           76|                                                                                                                                                                                         
                                                           108
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4CP0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4CP0)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4CP0)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        B4UMX2_CANGA | B4UMX2: 4cp1 4cp2

(-) Related Entries Specified in the PDB File

4cou CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM CANDIDA GLABRATA IN COMPLEX WITH LACTOSE
4cov CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM CANDIDA GLABRATA IN COMPLEX WITH GALA1- 3GAL
4cow CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM CANDIDA GLABRATA IN COMPLEX WITH THE T- ANTIGEN (GALB1-3GALNAC)
4coy CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM CANDIDA GLABRATA IN COMPLEX WITH GALB1- 4GLCNAC
4coz CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM CANDIDA GLABRATA IN COMPLEX WITH GALB1- 3GLCNAC
4cp1 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 9 A DOMAIN ( EPA9A) FROM CANDIDA GLABRATA IN COMPLEX WITH GALB1- 3GLCNAC
4cp2 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 9 A DOMAIN ( EPA9A) FROM CANDIDA GLABRATA IN COMPLEX WITH GALB1- 4GLCNAC