4C3L - JenaLib

Title :   STRUCTURE OF WILDTYPE PII FROM S. ELONGATUS AT HIGH RESOLUTION

Authors :   K. Zeth, K. Forchhammer

Date :   25 Aug 13 (Deposition) - 15 Jan 14 (Release) - 03 Dec 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym. Unit : A
Biol. Unit 1: A  (3x)

Keywords :   Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Zeth, O. Fokina, K. Forchhammer
Structural Basis And Target-Specific Modulation Of Adp Sensing By The Synechococcus Elongatus Pii Signaling Protein.
J. Biol. Chem. V. 289 8960 2014
PubMed-ID: 24519945 | Reference-DOI: 10.1074/JBC.M113.536557

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 2)

Sites (2, 2)

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 2)

Asymmetric Unit (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PII_GLNB_DOM	PS51343	P-II protein family profile.	GLNB_SYNE7	1-112	1	A:1-106
2	PII_GLNB_CTER	PS00638	P-II protein C-terminal region signature.	GLNB_SYNE7	83-96	1	A:83-96

Biological Unit 1 (2, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PII_GLNB_DOM	PS51343	P-II protein family profile.	GLNB_SYNE7	1-112	3	A:1-106
2	PII_GLNB_CTER	PS00638	P-II protein C-terminal region signature.	GLNB_SYNE7	83-96	3	A:83-96

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:89
 aligned with GLNB_SYNE7 | P0A3F4 from UniProtKB/Swiss-Prot  Length:112

    Alignment length:106
                                    10        20        30        40        50        60        70        80        90       100      
           GLNB_SYNE7     1 MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGE 106
               SCOP domains d4c3la_ A: PII (product of glnB)                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee...hhhhhhhhhhhh.....eeeeeee.-----------------..eeeeeeeeeehhhhhhhhhhhhhhhhhhhh...eeeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) PII_GLNB_DOM  PDB: A:1-106 UniProt: 1-112                                                                  PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------PII_GLNB_CTER ---------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 4c3l A   1 MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGF-----------------EFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGE 106
                                    10        20        30     |   -         -   |    60        70        80        90       100      
                                                              36                54

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Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

Asymmetric Unit(hide GO term definitions)

Chain A (GLNB_SYNE7 | P0A3F4)

molecular function
	GO:0030234	enzyme regulator activity	Binds to and modulates the activity of an enzyme.
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0050790	regulation of catalytic activity	Any process that modulates the activity of an enzyme.
	GO:0006808	regulation of nitrogen utilization	Any process that modulates the frequency, rate or extent of nitrogen utilization.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.

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Description