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(-) Description

Title :  TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS
 
Authors :  C. H. S. Aylett, J. Lowe
Date :  02 May 12  (Deposition) - 03 Oct 12  (Release) - 24 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  7.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,S,T,U,V,W,X,Y,Z
Biol. Unit 1:  A,B,S,T  (1x)
Biol. Unit 2:  C,D,S,T  (1x)
Biol. Unit 3:  E,F,U,V  (1x)
Biol. Unit 4:  G,H,U,V  (1x)
Biol. Unit 5:  I,J,W,X  (1x)
Biol. Unit 6:  K,L,W,X  (1x)
Biol. Unit 7:  M,N,Y,Z  (1x)
Biol. Unit 8:  O,P,Y,Z  (1x)
Keywords :  Structural Protein-Dna Complex, Partition, Segregation (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. H. S. Aylett, J. Lowe
Superstructure Of The Centromeric Complex Of Tubzrc Plasmid Partitioning Systems.
Proc. Natl. Acad. Sci. Usa V. 109 16522 2012
PubMed-ID: 23010931  |  Reference-DOI: 10.1073/PNAS.1210899109

(-) Compounds

Molecule 1 - TUBR FROM BACILLUS THURINGIENSIS PBTOXIS
    Atcc35646
    ChainsA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPHIS17
    Expression System StrainBL21
    Expression System Taxid511693
    Expression System VariantC41
    Expression System Vector TypePLASMID
    Organism ScientificBACILLUS THURINGIENSIS
    Organism Taxid1428
    StrainSEROVAR ISRAELENSIS
 
Molecule 2 - TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 24 BP
    ChainsS, U, W, Y
    EngineeredYES
    FragmentSENSE STRAND
    Organism ScientificBACILLUS THURINGIENSIS
    Organism Taxid1428
    SyntheticYES
 
Molecule 3 - TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 24 BP
    ChainsT, V, X, Z
    EngineeredYES
    FragmentANTISENSE STRAND
    Organism ScientificBACILLUS THURINGIENSIS
    Organism Taxid1428
    SyntheticYES

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324
Asymmetric Unit ABCDEFGHIJKLMNOPSTUVWXYZ
Biological Unit 1 (1x)AB              ST      
Biological Unit 2 (1x)  CD            ST      
Biological Unit 3 (1x)    EF            UV    
Biological Unit 4 (1x)      GH          UV    
Biological Unit 5 (1x)        IJ          WX  
Biological Unit 6 (1x)          KL        WX  
Biological Unit 7 (1x)            MN        YZ
Biological Unit 8 (1x)              OP      YZ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 48)

Asymmetric Unit (1, 48)
No.NameCountTypeFull Name
1MSE48Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 5 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 6 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 7 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 8 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4ASO)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ASO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ASO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ASO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ASO)

(-) Exons   (0, 0)

(no "Exon" information available for 4ASO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso A  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain B from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso B  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain C from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso C  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain D from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso D  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain E from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso E  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain F from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso F  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain G from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso G  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain H from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso H  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain I from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso I  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain J from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso J  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain K from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso K  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain L from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso L  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain M from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso M  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain N from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso N  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain O from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso O  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain P from PDB  Type:PROTEIN  Length:93
 aligned with Q8KNP2_BACTI | Q8KNP2 from UniProtKB/TrEMBL  Length:104

    Alignment length:93
                                    15        25        35        45        55        65        75        85        95   
          Q8KNP2_BACTI    6 FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeehhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  4aso P  6 FYTLNIAEIAERIGNDDCAYQVLmAFINENGEAQmLNKTAVAEmIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA 98
                                    15        25   |    35    |   45   |    55        65        75        85        95   
                                                  29-MSE     40-MSE   49-MSE                                             

Chain S from PDB  Type:DNA  Length:24
                                                       
                  4aso S  1 TTTAAGTTTAACTTTCAGTTTAAC 24
                                    10        20    

Chain T from PDB  Type:DNA  Length:24
                                                       
                  4aso T  1 GTTAAACTGAAAGTTAAACTTAAA 24
                                    10        20    

Chain U from PDB  Type:DNA  Length:24
                                                       
                  4aso U  1 TTTAAGTTTAACTTTCAGTTTAAC 24
                                    10        20    

Chain V from PDB  Type:DNA  Length:24
                                                       
                  4aso V  1 GTTAAACTGAAAGTTAAACTTAAA 24
                                    10        20    

Chain W from PDB  Type:DNA  Length:24
                                                       
                  4aso W  1 TTTAAGTTTAACTTTCAGTTTAAC 24
                                    10        20    

Chain X from PDB  Type:DNA  Length:24
                                                       
                  4aso X  1 GTTAAACTGAAAGTTAAACTTAAA 24
                                    10        20    

Chain Y from PDB  Type:DNA  Length:24
                                                       
                  4aso Y  1 TTTAAGTTTAACTTTCAGTTTAAC 24
                                    10        20    

Chain Z from PDB  Type:DNA  Length:24
                                                       
                  4aso Z  1 GTTAAACTGAAAGTTAAACTTAAA 24
                                    10        20    

   Legend:   → Mismatch (orange background)
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 Classification and Annotation

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(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P   (Q8KNP2_BACTI | Q8KNP2)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8KNP2_BACTI | Q8KNP23m8e 3m8f 3m9a 4ass

(-) Related Entries Specified in the PDB File

4asn TUBR FROM BACILLUS MEGATERIUM PBM400
4ass TUBR BOUND TO TUBC - 26 BP - FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS