4WCA - JenaLib

Title :   CATALYTIC DOMAIN OF MOUSE 2',3'-CYCLIC NUCLEOTIDE 3'-PHOSPHODIESTERASE, WITH MUTATION H230Q, COMPLEXED WITH CITRATE

Authors :   M. Myllykoski, A. Raasakka, P. Kursula

Date :   04 Sep 14 (Deposition) - 23 Sep 15 (Release) - 25 Nov 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.85

Chains :   Asym./Biol. Unit : A

Keywords :   Hydrolase, Myelin, Nervous System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Raasakka, M. Myllykoski, S. Laulumaa, M. Lehtimaki, M. Hartlein, M. Moulin, I. Kursula, P. Kursula
Determinants Of Ligand Binding And Catalytic Activity In Th Myelin Enzyme 2', 3'-Cyclic Nucleotide 3'-Phosphodiesterase.
Sci Rep V. 5 16520 2015
PubMed-ID: 26563764 | Reference-DOI: 10.1038/SREP16520

Compounds

Molecule 1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE
	Chains	:	A
	EC Number	:	3.1.4.37
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PTH27
	Expression System Strain	:	ROSETTA
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	CATALYTIC DOMAIN, RESIDUES 179-378
	Gene	:	CNP, CNP1
	Mutation	:	YES
	Organism Common	:	HOUSE MOUSE
	Organism Scientific	:	MUS MUSCULUS
	Organism Taxid	:	10090
	Synonym	:	CNPASE

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 9)

Sites (8, 8)

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLN A:230 , THR A:232 , PHE A:235 , HIS A:309 , THR A:311 , PRO A:320 , VAL A:321 , 1PE A:402 , HOH A:548 , HOH A:551 , HOH A:563 , HOH A:579 , HOH A:634	binding site for residue CIT A 401
2	AC2	SOFTWARE	TYR A:168 , PRO A:226 , VAL A:228 , ASP A:317 , TYR A:376 , CIT A:401 , HOH A:511 , HOH A:605	binding site for residue 1PE A 402
3	AC3	SOFTWARE	ARG A:307 , VAL A:321 , HOH A:610	binding site for residue 1PE A 403
4	AC4	SOFTWARE	LYS A:273 , ASP A:317 , HOH A:638	binding site for residue 1PE A 404
5	AC5	SOFTWARE	LYS A:175 , SER A:178 , ARG A:182 , GLY A:227	binding site for residue CL A 405
6	AC6	SOFTWARE	GLN A:278 , LEU A:331 , GLU A:345 , LEU A:346 , PRO A:347 , MET A:360 , LYS A:366 , HOH A:587 , HOH A:592	binding site for residue 1PE A 406
7	AC7	SOFTWARE	ALA A:184 , MET A:367 , HOH A:580 , HOH A:611	binding site for residue 1PE A 407
8	AC8	SOFTWARE	PRO A:272 , ALA A:315 , ASP A:317 , TYR A:376 , GLY A:378 , HOH A:503 , HOH A:504	binding site for residue 1PE A 408

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:PROTEIN  Length:207
                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh........eeeeee.hhhh..hhhhhhhhhhhhhhh..eeeeeeeeeee...eeeeeee.hhhhhh........hhhhh........eeeeee......hhhhhhhhhhhhhhhhh..eee..eeeeeee..eeeeeeeeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wca A 161 EKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRHFEKLELVSYFGKRPPGVLQCTTKFCDYGKAAGAEEYAQQEVVKRSYGKAFKLSISALFVTPKTAGAQVVLTDQELQLWPSDLDKPSASEGLPPGSRAHVTLGcAADVQPVQTGLDLLDILQQVKGGAVGELPRGKLYSLGKGRWMLSLTKKMEVKAIFTGYYG 378
                                   170       180       190       200    || 217       227       237       247       257       267       277       287       297       307      |317       327       337|      351       361       371       
                                                                      205|                                                                                                  314-CSX                337|                                    
                                                                       213                                                                                                                          342

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (33, 33)

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	Ligands, Modified Residues, Ions
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