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(-) Description

Title :  CRYSTAL STRUCTURE OF CALS8 FROM MICROMONOSPORA ECHINOSPORA (P294S MUTANT)
 
Authors :  K. Michalska, L. Bigelow, M. Endres, G. Babnigg, C. A. Bingman, R. M. Yen S. Singh, M. K. Kharel, J. S. Thorson, G. N. Phillips Jr. , A. Joachimia Center For Structural Genomics (Mcsg), Enzyme Discovery For Product Biosynthesis (Natpro)
Date :  21 Jan 15  (Deposition) - 11 Feb 15  (Release) - 11 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.55
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Calicheamicin, Oxidoreductase, Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Enzyme Discovery For Natural Product Biosynthesis, Natpro (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Michalska, L. Bigelow, M. Endres, G. Babnigg, C. A. Bingman, R. M. Yennamalli, S. Singh, M. K. Kharel, J. S. Thorson, G. N. Phillips Jr. , A. Joachimiak
Crystal Structure Of Cals8 From Micromonospora Echinospora
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CALS8
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG68
    Expression System Strain: BL21 (DE3) PGROW7-K
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CALS8
    Mutation: YES
    Organism Scientific: MICROMONOSPORA ECHINOSPORA
    Organism Taxid: 1877

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 13)

Asymmetric/Biological Unit (2, 13)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2MSE12Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:254 , MSE A:262 , HOH B:508binding site for residue GOL A 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XRR)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Glu A:422 -Pro A:423
2Glu B:422 -Pro B:423

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XRR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XRR)

(-) Exons   (0, 0)

(no "Exon" information available for 4XRR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:453
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhhh.......hhhhhhhhhhhh..eeee..hhhhhhh.eeee.............hhhhhhhhhhhhhhh....eeee......hhhhhhhhhhhh..........eeee........hhhhhh....eeeee.hhhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..ee..ee...........hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..............hhhhhhhhhhh...eeeee....hhhhhhhhhh.....hhhhhhh...eeee...hhhhhh.hhhhhhh.....eeeee.....hhhhhhhhhhh.eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xrr A  -2 SNAmPFLPDPSPLKVVIAGAGYVGTCLAVTLAGRGAEVVAVDSDPGTVADLRAGRCRLPEPGLAGAVRDLAATGRLTASTSYDPVGAADVVIVTVGTPTDAGHEmVTDQLVAACEQIAPRLRAGQLVILKSTVSPGTTRTLVAPLLESGGLVHERDFGLAFCPERLAEGVALAQVRTLPVVVGGCGPRSAAAAERFWRSALGVDVRQVPSAESAEVVKLATNWWIDANVAIANELARYCAVLGVDVLDVIGAANTLPKGSSmVNLLLPGVGVGGSCLTKDPWmAWRDGRDRGVSLRTVETARAVNDDmPRHTAAVIADELVKLGRDRNDTTIAVLGAAFKNDTGDVRNTPVRGVVAALRDSGFRVRIFDPLADPAEIVARFGTAPAASLDEAVSGAGCLAFLAGHRQFHELDFGALAERVDEPCLVFDGRmHLPPARIRELHRFGFAYRGIGR 453
                               |    10        20        30        40        50        60        70        80        90       100    |  110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260 |     270       280  |    290       300       310       320       330       340       350       360       370       380       390       400       410       420       430|      440       450   
                               |    6|                                                                                            105-MSE                                                                                                                                                      262-MSE              283-MSE                  308-MSE                                                                                                                    431-MSE                  
                               1-MSE10                                                                                                                                                                                                                                                                                                                                                                                                                                                           


Chain B from PDB  Type:PROTEIN  Length:449
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhh...hhhhhhhhhhh..eeee..hhhhhhh.eeee.............hhhhhhhhhhhhhhh....eeee......hhhhhhhhhhhh..........eeee........hhhhhh....eeeee.hhhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..ee..ee...........hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhhhh.eeeee....hhhhhhhhhh.....hhhhhhh...eeee...hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh.eeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xrr B  -2 SNAmPFLPDPGEPSPLKVVIAGAGYVGTCLAVTLAGRGAEVVAVDSDPGTVADLREPGLAGAVRDLAATGRLTASTSYDPVGAADVVIVTVGTPTDAGHEmVTDQLVAACEQIAPRLRAGQLVILKSTVSPGTTRTLVAPLLESGGLVHERDFGLAFCPERLAEGVALAQVRTLPVVVGGCGPRSAAAAERFWRSALGVDVRQVPSAESAEVVKLATNWWIDANVAIANELARYCAVLGVDVLDVIGAANTLPKGSSmVNLLLPGVGVGGSCLTKDPWmAWRDGRDRGVSLRTVETARAVNDDmPRHTAAVIADELVKLGRDRNDTTIAVLGAAFKNDTGDVRNTPVRGVVAALRDSGFRVRIFDPLADPAEIVARFGTAPAASLDEAVSGAGCLAFLAGHRQFHELDFGALAERVDEPCLVFDGRmHLPPARIRELHRFGFAYRGIGR 453
                               |     7        17        27        37        47    ||  64        74        84        94       104|      114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304   |   314       324       334       344       354       364       374       384       394       404       414       424      |434       444         
                               1-MSE                                             52|                                          105-MSE                                                                                                                                                      262-MSE              283-MSE                  308-MSE                                                                                                                    431-MSE                  
                                                                                  60
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XRR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XRR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XRR)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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        Q8KNF6_MICEC | Q8KNF6: 4xr9

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