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(-) Description

Title :  THE CRYSTAL STRUCTURE OF HEMAGGLUTININ FROM A H3N8 INFLUENZA VIRUS ISOLATED FROM NEW ENGLAND HARBOR SEALS IN COMPLEX WITH 3'SLN
 
Authors :  H. Yang, J. M. Villanueva, L. V. Gubareva, J. Stevens
Date :  28 Aug 14  (Deposition) - 14 Jan 15  (Release) - 18 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,E,F  (1x)
Biol. Unit 2:  B,C,D  (1x)
Keywords :  Hemagglutinin, Influenza Virus, Seal, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Yang, H. T. Nguyen, P. J. Carney, Z. Guo, J. C. Chang, J. Jones, C. T. Davis, J. M. Villanueva, L. V. Gubareva, J. Stevens
Structural And Functional Analysis Of Surface Proteins From An A(H3N8) Influenza Virus Isolated From New England Harbor Seals.
J. Virol. V. 89 2801 2015
PubMed-ID: 25540377  |  Reference-DOI: 10.1128/JVI.02723-14

(-) Compounds

Molecule 1 - HEMAGGLUTININ
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Common: CABBAGE LOOPER
    Expression System Taxid: 7111
    Fragment: UNP RESIDUES 24-519
    Gene: HA
    Organism Scientific: INFLUENZA A VIRUS (A/HARBOR SEAL/MASSACHUSETTS/1/2011(H3N8))
    Organism Taxid: 1136533

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A   EF
Biological Unit 2 (1x):  BCD  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 42)

Asymmetric Unit (4, 42)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2GAL4Ligand/IonBETA-D-GALACTOSE
3NAG32Ligand/IonN-ACETYL-D-GLUCOSAMINE
4SIA4Ligand/IonO-SIALIC ACID
Biological Unit 1 (4, 21)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2GAL2Ligand/IonBETA-D-GALACTOSE
3NAG16Ligand/IonN-ACETYL-D-GLUCOSAMINE
4SIA2Ligand/IonO-SIALIC ACID
Biological Unit 2 (4, 21)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2GAL2Ligand/IonBETA-D-GALACTOSE
3NAG16Ligand/IonN-ACETYL-D-GLUCOSAMINE
4SIA2Ligand/IonO-SIALIC ACID

(-) Sites  (22, 22)

Asymmetric Unit (22, 22)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:38 , THR A:318 , LEU A:381 , HOH A:1108 , HOH A:1207 , HOH A:1209binding site for Mono-Saccharide NAG A 1004 bound to ASN A 38
02AC2SOFTWAREASN A:165 , THR A:167 , SER F:219 , PRO F:221 , LEU F:222binding site for Poly-Saccharide residues NAG A 1005 through NAG A 1006 bound to ASN A 165
03AC3SOFTWARESER A:45 , ASN A:285 , VAL A:297 , HOH A:1226 , HOH A:1254 , HOH A:1286binding site for Mono-Saccharide NAG A 1007 bound to ASN A 285
04AC4SOFTWAREASN B:38 , THR B:318 , LEU B:381 , HOH B:1158 , HOH B:1166 , HOH B:1206binding site for Mono-Saccharide NAG B 1004 bound to ASN B 38
05AC5SOFTWAREASN B:165 , THR B:167 , HOH B:1203 , SER D:219 , PRO D:221 , LEU D:222binding site for Poly-Saccharide residues NAG B 1005 through NAG B 1006 bound to ASN B 165
06AC6SOFTWARESER B:45 , ASN B:285 , VAL B:297 , HOH B:1162 , HOH B:1170 , HOH B:1175binding site for Mono-Saccharide NAG B 1007 bound to ASN B 285
07AC7SOFTWAREASN C:38 , THR C:318 , LEU C:381 , HOH C:1261binding site for Poly-Saccharide residues NAG C 1004 through NAG C 1005 bound to ASN C 38
08AC8SOFTWARESER B:219 , PRO B:221 , LEU B:222 , HOH B:1217 , ASN C:165 , ILE C:242 , HOH C:1156 , HOH C:1286binding site for Poly-Saccharide residues NAG C 1006 through NAG C 1007 bound to ASN C 165
09AC9SOFTWARESER C:45 , ASN C:285 , VAL C:297binding site for Mono-Saccharide NAG C 1008 bound to ASN C 285
10AD1SOFTWAREHOH C:1101 , ASN D:38 , THR D:318 , LEU D:381 , HOH D:771 , HOH D:806binding site for Poly-Saccharide residues NAG D 601 through BMA D 603 bound to ASN D 38
11AD2SOFTWARELEU C:222 , ASN D:165 , THR D:167 , HOH D:768 , HOH D:866binding site for Poly-Saccharide residues NAG D 604 through NAG D 605 bound to ASN D 165
12AD3SOFTWAREASN D:285 , VAL D:297 , HOH D:760binding site for Mono-Saccharide NAG D 606 bound to ASN D 285
13AD4SOFTWAREASN E:38 , THR E:40 , THR E:318 , LEU E:381 , HOH E:1186 , HOH E:1212binding site for Poly-Saccharide residues NAG E 1004 through NAG E 1005 bound to ASN E 38
14AD5SOFTWARESER A:219 , LEU A:222 , HOH A:1139 , ASN E:165 , ILE E:242 , HOH E:1115 , HOH E:1194 , HOH E:1251binding site for Poly-Saccharide residues NAG E 1006 through NAG E 1007 bound to ASN E 165
15AD6SOFTWAREASN E:285 , VAL E:297 , HOH E:1180 , HOH E:1205binding site for Mono-Saccharide NAG E 1008 bound to ASN E 285
16AD7SOFTWAREASN F:38 , THR F:40 , THR F:318 , LEU F:381 , HOH F:788 , HOH F:810binding site for Poly-Saccharide residues NAG F 601 through BMA F 603 bound to ASN F 38
17AD8SOFTWAREPRO E:221 , LEU E:222 , HOH E:1214 , ASN F:165 , THR F:167 , HOH F:754 , HOH F:768 , HOH F:818binding site for Poly-Saccharide residues NAG F 604 through NAG F 605 bound to ASN F 165
18AD9SOFTWAREASN F:285 , VAL F:297binding site for Mono-Saccharide NAG F 606 bound to ASN F 285
19AE1SOFTWARETYR A:98 , GLY A:134 , GLU A:135 , SER A:136 , GLY A:137 , TRP A:153 , HIS A:183 , GLU A:190 , LEU A:194 , GLN A:226 , HOH A:1198binding site for Poly-Saccharide residues SIA A 1001 through NAG A 1003
20AE2SOFTWARETYR A:98 , GLY A:134 , GLU A:135 , SER A:136 , GLY A:137 , TRP A:153 , HIS A:183 , GLU A:190 , LEU A:194 , GLN A:226 , HOH A:1198 , TYR B:98 , GLY B:134 , GLU B:135 , SER B:136 , GLY B:137 , TRP B:153 , HIS B:183 , GLU B:190 , LEU B:194 , GLN B:226 , HOH B:1179 , HOH B:1187 , HOH B:1195binding site for Poly-Saccharide residues SIA B 1001 through NAG B 1003
21AE3SOFTWARETYR B:98 , GLY B:134 , GLU B:135 , SER B:136 , GLY B:137 , TRP B:153 , HIS B:183 , GLU B:190 , LEU B:194 , GLN B:226 , HOH B:1179 , HOH B:1187 , HOH B:1195 , TYR C:98 , GLY C:134 , GLU C:135 , SER C:136 , GLY C:137 , TRP C:153 , HIS C:183 , GLU C:190 , LEU C:194 , GLN C:226 , GLY C:228 , HOH C:1159 , HOH C:1204binding site for Poly-Saccharide residues SIA C 1001 through NAG C 1003
22AE4SOFTWARETYR C:98 , GLY C:134 , GLU C:135 , SER C:136 , GLY C:137 , TRP C:153 , HIS C:183 , GLU C:190 , LEU C:194 , GLN C:226 , GLY C:228 , HOH C:1159 , HOH C:1204 , TYR E:98 , GLY E:134 , GLU E:135 , SER E:136 , GLY E:137 , TRP E:153 , HIS E:183 , GLU E:190 , LEU E:194 , GLN E:226 , HOH E:1187 , HOH E:1239binding site for Poly-Saccharide residues SIA E 1001 through NAG E 1003

(-) SS Bonds  (36, 36)

Asymmetric Unit
No.Residues
1A:14 -A:466
2A:52 -A:277
3A:64 -A:76
4A:97 -A:139
5A:281 -A:305
6A:473 -A:477
7B:14 -B:466
8B:52 -B:277
9B:64 -B:76
10B:97 -B:139
11B:281 -B:305
12B:473 -B:477
13C:14 -C:466
14C:52 -C:277
15C:64 -C:76
16C:97 -C:139
17C:281 -C:305
18C:473 -C:477
19D:14 -D:466
20D:52 -D:277
21D:64 -D:76
22D:97 -D:139
23D:281 -D:305
24D:473 -D:477
25E:14 -E:466
26E:52 -E:277
27E:64 -E:76
28E:97 -E:139
29E:281 -E:305
30E:473 -E:477
31F:14 -F:466
32F:52 -F:277
33F:64 -F:76
34F:97 -F:139
35F:281 -F:305
36F:473 -F:477

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Asn A:54 -Pro A:55
2Asn B:54 -Pro B:55
3Asn C:54 -Pro C:55
4Asn D:54 -Pro D:55
5Asn E:54 -Pro E:55
6Asn F:54 -Pro F:55

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WA2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WA2)

(-) Exons   (0, 0)

(no "Exon" information available for 4WA2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:491
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee......eee.......eee..eee.ee......eeee...eee....hhhhhhhhhhhhhhhh.....eeee..........ee..hhhhhhhhhhhhh...eee.......ee....eeeeee..eee....eee.ee.......eeeeee......eeeeeeeee..hhhhhhhhhh....eeeee....eeee...............eeeeeeeee....eeeeeeee.eeee.eeee......eeee....eeeee..eee..eee.....ee.......ee..ee......eee............................eeeeeee..eeeeeeehhhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wa2 A   8 NNTATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGRDCKLMDALLGDPHCDVFQDETWDLYVERSSASSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGESGACKRGPANGFFSRLNWLTKSGSVYPLLNVTMPNNDNFDKLYVWGVHHPSTNQEQTNLYVQASGRVTVSTRRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRGYFKMRTGKSSIMRSNAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQSTLKLATGMRNVPGLFGAIAGFIENGWEGMIDGWYGFRHKNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFLEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDIYRDEALNNRFQIK 503
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317      |332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502 
                                                                                                                                                                                                                                                                                                                                                      324|                                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                       330                                                                                                                                                                             


Chain B from PDB  Type:PROTEIN  Length:491
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee......eee.......eee..eee.ee......eeee...eee....hhhhhhhhhhhhhhhh.....eeee..........ee..hhhhhhhhhhhhh...eee.......ee....eeeeee..eee....eee.ee.......eeeeee......eeeeeeeee..hhhhhhhhhh....eeeee....eeee...............eeeeeeeee....eeeeeeee.eeee.eeee......eeee....eeeee..eee..eee.....ee.......ee..ee......eee............................eeeeeee..eeeeeeehhhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wa2 B   8 NNTATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGRDCKLMDALLGDPHCDVFQDETWDLYVERSSASSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGESGACKRGPANGFFSRLNWLTKSGSVYPLLNVTMPNNDNFDKLYVWGVHHPSTNQEQTNLYVQASGRVTVSTRRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRGYFKMRTGKSSIMRSNAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQSTLKLATGMRNVPGLFGAIAGFIENGWEGMIDGWYGFRHKNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFLEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDIYRDEALNNRFQIK 503
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317      |332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502 
                                                                                                                                                                                                                                                                                                                                                      324|                                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                       330                                                                                                                                                                             


Chain C from PDB  Type:PROTEIN  Length:491
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee......eee.......eee..eee.ee......eeee...eee....hhhhhhhhhhhhhhhh.....eeee..........ee..hhhhhhhhhhhhh...eee.......eeeee.eeeeee..eee....eeeeee.......eeeeee......eeeeeeeee..hhhhhhhhhh....eeeee....eeee...............eeeeeeeee....eeeeeeee.eeee.eeee......eeee....eeeee..eee..eee.....ee.......ee..ee......eee............................eeeeeee..eeeeeeehhhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wa2 C   8 NNTATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGRDCKLMDALLGDPHCDVFQDETWDLYVERSSASSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGESGACKRGPANGFFSRLNWLTKSGSVYPLLNVTMPNNDNFDKLYVWGVHHPSTNQEQTNLYVQASGRVTVSTRRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRGYFKMRTGKSSIMRSNAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQSTLKLATGMRNVPGLFGAIAGFIENGWEGMIDGWYGFRHKNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFLEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDIYRDEALNNRFQIK 503
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317      |332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502 
                                                                                                                                                                                                                                                                                                                                                      324|                                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                       330                                                                                                                                                                             


Chain D from PDB  Type:PROTEIN  Length:491
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee......eee.......eee..eee.ee......eeee...eee....hhhhhhhhhhhhhhhh.....eeee..........ee..hhhhhhhhhhhhh...eee.......ee....eeeeee..eee....eee.ee.......eeeeee......eeeeeeeee..hhhhhhhhhh....eeeee....eeee...............eeeeeeeee....eeeeeeee.eeee.eeee......eeee....eeeee..eee..eee.....ee.......ee..ee......eee............................eeeeeee..eeeeeeehhhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wa2 D   8 NNTATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGRDCKLMDALLGDPHCDVFQDETWDLYVERSSASSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGESGACKRGPANGFFSRLNWLTKSGSVYPLLNVTMPNNDNFDKLYVWGVHHPSTNQEQTNLYVQASGRVTVSTRRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRGYFKMRTGKSSIMRSNAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQSTLKLATGMRNVPGLFGAIAGFIENGWEGMIDGWYGFRHKNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFLEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDIYRDEALNNRFQIK 503
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317      |332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502 
                                                                                                                                                                                                                                                                                                                                                      324|                                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                       330                                                                                                                                                                             


Chain E from PDB  Type:PROTEIN  Length:491
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee......eee.......eee..eee.ee......eeee...eee....hhhhhhhhhhhhhhhh.....eeee..........ee..hhhhhhhhhhhhh...eee.......eeeee.eeeeee..eee....eeeeee.......eeeeee......eeeeeeeee..hhhhhhhhhh....eeeeee..eeeee...............eeeeeeeee....eeeeeeee.eeee.eeee......eeee....eeeee..eee..eee.....ee.......ee..ee......eee............................eeeeee.....eeeeehhhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wa2 E   8 NNTATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGRDCKLMDALLGDPHCDVFQDETWDLYVERSSASSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGESGACKRGPANGFFSRLNWLTKSGSVYPLLNVTMPNNDNFDKLYVWGVHHPSTNQEQTNLYVQASGRVTVSTRRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRGYFKMRTGKSSIMRSNAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQSTLKLATGMRNVPGLFGAIAGFIENGWEGMIDGWYGFRHKNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFLEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDIYRDEALNNRFQIK 503
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317      |332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502 
                                                                                                                                                                                                                                                                                                                                                      324|                                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                       330                                                                                                                                                                             


Chain F from PDB  Type:PROTEIN  Length:491
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee......eee.......eee..eee.ee......eeee...eee....hhhhhhhhhhhhhhhh.....eeee..........ee..hhhhhhhhhhhhh...eee.......ee....eeeeee..eee....eee.ee.......eeeeee......eeeeeeeee..hhhhhhhhhh....eeeee....eeee...............eeeeeeeee....eeeeeeee.eeee.eeee......eeee....eeeee..eee..eee.....ee.......ee..ee......eee............................eeeeeee..eeeeeeehhhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wa2 F   8 NNTATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGRDCKLMDALLGDPHCDVFQDETWDLYVERSSASSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGESGACKRGPANGFFSRLNWLTKSGSVYPLLNVTMPNNDNFDKLYVWGVHHPSTNQEQTNLYVQASGRVTVSTRRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRGYFKMRTGKSSIMRSNAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQSTLKLATGMRNVPGLFGAIAGFIENGWEGMIDGWYGFRHKNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFLEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDIYRDEALNNRFQIK 503
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317      |332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502 
                                                                                                                                                                                                                                                                                                                                                      324|                                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                       330
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WA2)

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(no "CATH Domain" information available for 4WA2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WA2)

(-) Gene Ontology  (17, 17)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        I6NNE1_9INFA | I6NNE1: 4wa1

(-) Related Entries Specified in the PDB File

4wa1 4wa3 4wa4 4wa5